BO24708.complete Sequence
925 bp assembled on 2010-05-17
GenBank Submission: KX794095
> BO24708.complete
GAAGTTATCAGTCGACATGAAATATATTCGGGAAATCTTTTCAATCGCTC
TTCTTCTGACAGAAGTCGGAGCTGCACACTCTAGTTGGTGGAATTCTTCA
GCCTCGTACTTGCATGGCAGGCCACCAGTGAGAACATTGAACAAGAATGG
AATTCGTCGAACCTCGGGTGGTCATGCGGTCCCTTGGCTATTAAGGATAG
TTGATGGACCTACTTTCGTCTGCGGAGCCTCGTACTTAAGTGCTTTGTAT
GCCCTCACCTCAGCAAACTGTATGCATAGTCATAGGTCACAGATGGAGTC
GCTCAGTGTGGAGTTGGTATCGTCGGACAGCCGGCAGGATAATCAGCTTG
ATTCGCATGATCCTCCAAACGCCCTTATCCGCAACATAATCGTTTCGAAG
GATTGGCACTGGCCTGGAACTTTTATGGATGTCGCTGTCATAGAACTGAC
CAACCGCCTGCGTGGCAATCGGAATAACTATGTTACCCTCTGTACCAATC
CGCTGAGCTCGTACAAAAGCCTTTCCGTTGTGTCCTACGGCGCAGGACCC
GCGGAAAACGTACGAACAGAAGAAATTGAGGTGCTCAACCGAATGATCTG
CGATTCGGCGTACGGCAATTTTCTTCTGCGCGAAACTGTCGCCTGTGCCA
AGGAATTTAAAAGGAGCGCAGACTGTATGTTTAGCGCCGGATGTCCTGTG
ACTGCTGGAGATCAGCTTTGTGGTATCGTCGCCTGGAGTCCCGCCTGCAA
GAGATCCAATTTACCAGGGATCTTCACCGATATCCATCAGGTTAAACGAT
TCATTCTGAAGGCGATCAGTGGAAAGCATAAGGGCACTAGCCATCCAAAA
ACGGAACGGGCATCAGATAACGTACCCGAGTGGCACTCGGGTCTCTGGCT
AAGTCGTGCAAGCTTTCTAGACCAT
BO24708.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:47:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34130-RA | 894 | CG34130-PA | 1..891 | 17..907 | 4455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:47:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34130-RA | 974 | CG34130-RA | 18..908 | 17..907 | 4455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26189070..26189960 | 907..17 | 4455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:47:43 has no hits.
BO24708.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 12:09:49 Download gff for
BO24708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34130-RA | 1..891 | 17..909 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:09 Download gff for
BO24708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34130-RA | 18..908 | 17..909 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:31:56 Download gff for
BO24708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34130-RA | 18..908 | 17..909 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:31:56 Download gff for
BO24708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26189068..26189960 | 17..909 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:09 Download gff for
BO24708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22014790..22015682 | 17..909 | 99 | | Minus |
BO24708.pep Sequence
Translation from 16 to 925
> BO24708.pep
MKYIREIFSIALLLTEVGAAHSSWWNSSASYLHGRPPVRTLNKNGIRRTS
GGHAVPWLLRIVDGPTFVCGASYLSALYALTSANCMHSHRSQMESLSVEL
VSSDSRQDNQLDSHDPPNALIRNIIVSKDWHWPGTFMDVAVIELTNRLRG
NRNNYVTLCTNPLSSYKSLSVVSYGAGPAENVRTEEIEVLNRMICDSAYG
NFLLRETVACAKEFKRSADCMFSAGCPVTAGDQLCGIVAWSPACKRSNLP
GIFTDIHQVKRFILKAISGKHKGTSHPKTERASDNVPEWHSGLWLSRASF
LDH
BO24708.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34130-PA | 297 | CG34130-PA | 1..297 | 1..297 | 1582 | 100 | Plus |
| CG34129-PA | 314 | CG34129-PA | 43..261 | 45..263 | 287 | 28.6 | Plus |
| Sems-PA | 275 | CG10586-PA | 37..267 | 36..267 | 236 | 27.6 | Plus |
| CG11037-PA | 292 | CG11037-PA | 61..285 | 48..267 | 211 | 26.6 | Plus |
| CG3650-PA | 249 | CG3650-PA | 49..247 | 66..267 | 210 | 29.5 | Plus |
