Clone BO24710 Report

Search the DGRC for BO24710

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG33308-RA
Protein status:BO24710.pep: Imported from assembly
Sequenced Size:610

Clone Sequence Records

BO24710.complete Sequence

610 bp assembled on 2010-05-17

GenBank Submission: KX797497

> BO24710.complete
GAAGTTATCAGTCGACATGTCGAAAACAAATGAAACTTGTATAAATGGTG
ACATCGCGCTGGAGAAAGAAGAATCACTTATCGATATTAGTAGCAGTTCT
CTGGAGGCTCAGCCAAATTTAAGCACTTCGGAATTGGAGACAATTGTGAG
AAACGCCGTTAAACAGATTCCAACACCTCCAAACTATGTCGACGTAACTG
TGAATAGCATTGCAAATGCTATTCTGCCCAAAATATTAAACAAATATGAT
ACGATCGAAATGAAGGTTGAGAATATCCAAAAATCCCTGGACACTTATAG
TCGGCAAGCGGAAGCAGTGGATCAAGACATAGCTGAAATATTTTTGGATT
TGCACACTATTTATAATAGGATCGAAAAACTCGATAAAAGTGGCAGTAAG
TTATGCAGCGCGAAAAAGGCAATTTTATTAAGACATGTTAAGAAGTCTGA
AGACTTACTGAACCAGTCGCGCCATTATCTCACAAACGATCCCAAAGAGT
TGAGTGCCCATCTTGTTGGTCCACCAACGGAAGTCCCATCGATTCAAAAG
GAGCACACAGCAAACTCGGACGGCAGGACGACAGGAAGTATCGCAAGCTT
TCTAGACCAT

BO24710.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG33308-RA 579 CG33308-PA 1..576 17..592 2880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG33308-RA 909 CG33308-RA 105..680 17..592 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14802438..14802972 17..551 2675 100 Plus
2L 23513712 2L 14803020..14803064 548..592 225 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:34:39 has no hits.

BO24710.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:14 Download gff for BO24710.complete
Subject Subject Range Query Range Percent Splice Strand
HDC02577-RA 105..680 17..594 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:41 Download gff for BO24710.complete
Subject Subject Range Query Range Percent Splice Strand
CG33308-RA 105..680 17..594 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:02 Download gff for BO24710.complete
Subject Subject Range Query Range Percent Splice Strand
CG33308-RA 105..680 17..594 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:02 Download gff for BO24710.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14802438..14802971 17..550 100 -> Plus
2L 14803023..14803064 551..594 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:41 Download gff for BO24710.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14802438..14802971 17..550 100 -> Plus
arm_2L 14803023..14803064 551..594 95   Plus

BO24710.pep Sequence

Translation from 16 to 610

> BO24710.pep
MSKTNETCINGDIALEKEESLIDISSSSLEAQPNLSTSELETIVRNAVKQ
IPTPPNYVDVTVNSIANAILPKILNKYDTIEMKVENIQKSLDTYSRQAEA
VDQDIAEIFLDLHTIYNRIEKLDKSGSKLCSAKKAILLRHVKKSEDLLNQ
SRHYLTNDPKELSAHLVGPPTEVPSIQKEHTANSDGRTTGSIASFLDH

BO24710.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:42:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33308-PA 192 CG33308-PA 1..192 1..192 963 100 Plus