BO24714.complete Sequence
535 bp assembled on 2010-05-17
GenBank Submission: KX797323
> BO24714.complete
GAAGTTATCAGTCGACATGGACAACGGACCGATGGATGCCACGCCCACTG
CCGCCGCCTTCCGGCTGATTTTGCTTAGCAAATCGAATCCCGTGATGGGT
TGCTACATGTTCTGGACCAGTCTGCTCGTGCTGAAGATGCTCGTTATGTC
ACTACTCACCGCCCGCCAGCGCATGAAAACCAAGACCTATGCCAACCCAG
AGGATTTACGCCTGAGTCGGAGCACGGAGGTTCGATTCGGGGATCCCAAT
GTGGAACGAGTTCGTCGTGCTCATCGCAACGACCTAGAGAACATTTTGCC
CTTTCTTCTGATGTCGCTGGCCTATGTGGCCAGCGGACCGAATCCCCTGA
CCGCCCGTCTGCTCATCCGGATCGGTGCAAGTGCCCGGCTGATCCACACG
GTGGTCTACGCCATCATCCCGGTTCCGCAGCCAGCAAGAGCCCTGGCCTT
CTTCACCACCTTCGCCATCACCTGCTTCGAGGCGGGCTACGTGCTCGTCT
GCTGTATCAAGTACATTGCAAGCTTTCTAGACCAT
BO24714.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33177-RA | 504 | CG33177-PA | 1..501 | 17..517 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33177-RA | 862 | CG33177-RA | 178..683 | 12..517 | 2515 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15081544..15081799 | 12..267 | 1265 | 99.6 | Plus |
| X | 23542271 | X | 15081940..15082190 | 267..517 | 1255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:34:51 has no hits.
BO24714.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:14 Download gff for
BO24714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 1..501 | 17..519 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:46 Download gff for
BO24714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 183..683 | 17..519 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:05 Download gff for
BO24714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 183..683 | 17..519 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:05 Download gff for
BO24714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15081549..15081799 | 17..267 | 100 | -> | Plus |
| X | 15081941..15082190 | 268..519 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:46 Download gff for
BO24714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14975582..14975832 | 17..267 | 100 | -> | Plus |
| arm_X | 14975974..14976223 | 268..519 | 99 | | Plus |
BO24714.pep Sequence
Translation from 16 to 535
> BO24714.pep
MDNGPMDATPTAAAFRLILLSKSNPVMGCYMFWTSLLVLKMLVMSLLTAR
QRMKTKTYANPEDLRLSRSTEVRFGDPNVERVRRAHRNDLENILPFLLMS
LAYVASGPNPLTARLLIRIGASARLIHTVVYAIIPVPQPARALAFFTTFA
ITCFEAGYVLVCCIKYIASFLDH
BO24714.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:42:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33177-PA | 167 | CG33177-PA | 1..167 | 1..167 | 852 | 100 | Plus |
| CG33178-PC | 165 | CG33178-PC | 18..165 | 19..167 | 405 | 52.3 | Plus |
| CG33178-PA | 165 | CG33178-PA | 18..165 | 19..167 | 405 | 52.3 | Plus |
| Mgstl-PA | 152 | CG1742-PA | 7..147 | 19..160 | 402 | 58.5 | Plus |
| CG33178-PB | 177 | CG33178-PB | 18..177 | 19..167 | 383 | 49.1 | Plus |
