BO24721.complete Sequence
421 bp assembled on 2010-05-17
GenBank Submission: KX799171
> BO24721.complete
GAAGTTATCAGTCGACATGTTCAAATACGCTGTCGTCGTTCTCGCTCTCG
TTGCCTGCGCTGCTGCCAAGCCTGGACTCCTGGGTGCTCCCCTTGCTTAC
ACTGCTCCTCTGGCTTACTCTGCTCCTGCTGCCGTGGTAGCTGCTCCCGC
TCCAGTTGTGACCGCAACCAGTAGCCAGGTTATCGCCAGGAATTACAATG
GAATCGCCTCTGCTCCTGTGATTGCTCCCGTTGCTGCTCCTCTGGCTGCT
CCTGTGGTGGCGAAGTACGCGGCTACTCCTCTGGCTGCTCCTGTGGTGGC
GAAGTACGCGGCTACTCCTCTGGCTGCACGACTGGCCTACTCCTCGCCTT
TGGCTTACTCCGCACCACTGAGCTACGCTGCTGCTCCTGCACCATTTCTC
ATCGCAAGCTTTCTAGACCAT
BO24721.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32213-RB | 390 | CG32213-PB | 1..387 | 17..403 | 1935 | 100 | Plus |
825-Oak-RB | 390 | CG32208-PB | 1..387 | 17..403 | 1905 | 99.5 | Plus |
CG32214-RC | 351 | CG32214-PC | 1..272 | 17..288 | 1330 | 99.3 | Plus |
CG32213-RB | 390 | CG32213-PB | 217..272 | 272..327 | 265 | 98.2 | Plus |
CG32213-RB | 390 | CG32213-PB | 256..311 | 233..288 | 265 | 98.2 | Plus |
825-Oak-RB | 390 | CG32208-PB | 217..272 | 272..327 | 265 | 98.2 | Plus |
825-Oak-RB | 390 | CG32208-PB | 256..311 | 233..288 | 265 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32213-RB | 526 | CG32213-RB | 51..438 | 16..403 | 1940 | 100 | Plus |
825-Oak-RB | 514 | CG32208-RB | 51..438 | 16..403 | 1910 | 99.5 | Plus |
CG32214-RC | 756 | CG32214-RC | 54..326 | 16..288 | 1335 | 99.3 | Plus |
CG32213-RB | 526 | CG32213-RB | 268..323 | 272..327 | 265 | 98.2 | Plus |
CG32213-RB | 526 | CG32213-RB | 307..362 | 233..288 | 265 | 98.2 | Plus |
825-Oak-RB | 514 | CG32208-RB | 268..323 | 272..327 | 265 | 98.2 | Plus |
825-Oak-RB | 514 | CG32208-RB | 307..362 | 233..288 | 265 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19475961..19476335 | 29..403 | 1875 | 100 | Plus |
3L | 28110227 | 3L | 19471732..19472106 | 403..29 | 1845 | 99.5 | Minus |
3L | 28110227 | 3L | 19467471..19467730 | 29..288 | 1270 | 99.2 | Plus |
3L | 28110227 | 3L | 19472620..19472965 | 39..378 | 1060 | 87.7 | Plus |
3L | 28110227 | 3L | 19475153..19475447 | 327..39 | 745 | 84.4 | Minus |
3L | 28110227 | 3L | 19466728..19466952 | 245..39 | 685 | 88 | Minus |
3L | 28110227 | 3L | 19467675..19467788 | 272..385 | 510 | 96.5 | Plus |
3L | 28110227 | 3L | 19478430..19478568 | 88..226 | 485 | 89.9 | Plus |
3L | 28110227 | 3L | 19423906..19424044 | 88..226 | 485 | 89.9 | Plus |
3L | 28110227 | 3L | 19423106..19423298 | 247..54 | 320 | 78.9 | Minus |
3L | 28110227 | 3L | 19488102..19488245 | 88..240 | 280 | 80.4 | Plus |
3L | 28110227 | 3L | 19488045..19488123 | 49..127 | 275 | 89.9 | Plus |
3L | 28110227 | 3L | 19424757..19424836 | 141..220 | 265 | 88.8 | Plus |
3L | 28110227 | 3L | 19471808..19471863 | 288..233 | 265 | 98.2 | Minus |
3L | 28110227 | 3L | 19471847..19471902 | 327..272 | 265 | 98.2 | Minus |
3L | 28110227 | 3L | 19476165..19476220 | 272..327 | 265 | 98.2 | Plus |
3L | 28110227 | 3L | 19476204..19476259 | 233..288 | 265 | 98.2 | Plus |
3L | 28110227 | 3L | 19423004..19423102 | 378..279 | 255 | 86 | Minus |
3L | 28110227 | 3L | 19475123..19475209 | 318..232 | 255 | 86.2 | Minus |
3L | 28110227 | 3L | 19477672..19477760 | 403..315 | 250 | 85.4 | Minus |
3L | 28110227 | 3L | 19486827..19486933 | 378..271 | 250 | 84.3 | Minus |
3L | 28110227 | 3L | 19472858..19472914 | 232..288 | 240 | 94.7 | Plus |
3L | 28110227 | 3L | 19478373..19478428 | 49..104 | 205 | 91.1 | Plus |
3L | 28110227 | 3L | 19486877..19486968 | 288..197 | 205 | 81.5 | Minus |
3L | 28110227 | 3L | 19423849..19423904 | 49..104 | 190 | 89.3 | Plus |
Blast to na_te.dros performed 2014-11-28 02:35:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2891 | 159..42 | 151 | 60.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2999 | 258..30 | 143 | 57.1 | Minus |
BO24721.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:18 Download gff for
BO24721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32213-RB | 57..438 | 22..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:59 Download gff for
BO24721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32213-RB | 36..417 | 22..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:18 Download gff for
BO24721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32213-RB | 57..438 | 22..405 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:18 Download gff for
BO24721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19475956..19476335 | 22..405 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:59 Download gff for
BO24721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19469056..19469435 | 22..405 | 98 | | Plus |
BO24721.pep Sequence
Translation from 16 to 421
> BO24721.pep
MFKYAVVVLALVACAAAKPGLLGAPLAYTAPLAYSAPAAVVAAPAPVVTA
TSSQVIARNYNGIASAPVIAPVAAPLAAPVVAKYAATPLAAPVVAKYAAT
PLAARLAYSSPLAYSAPLSYAAAPAPFLIASFLDH
BO24721.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:43:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32213-PB | 129 | CG32213-PB | 1..129 | 1..129 | 626 | 100 | Plus |
825-Oak-PB | 129 | CG32208-PB | 1..129 | 1..129 | 623 | 99.2 | Plus |
CG12519-PB | 131 | CG12519-PB | 1..131 | 1..129 | 525 | 85.2 | Plus |
CG12519-PA | 131 | CG12519-PA | 1..131 | 1..129 | 525 | 85.2 | Plus |
CG32214-PC | 116 | CG32214-PC | 1..116 | 1..129 | 520 | 86.8 | Plus |