Clone BO24721 Report

Search the DGRC for BO24721

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG32213-RB
Protein status:BO24721.pep: Imported from assembly
Sequenced Size:421

Clone Sequence Records

BO24721.complete Sequence

421 bp assembled on 2010-05-17

GenBank Submission: KX799171

> BO24721.complete
GAAGTTATCAGTCGACATGTTCAAATACGCTGTCGTCGTTCTCGCTCTCG
TTGCCTGCGCTGCTGCCAAGCCTGGACTCCTGGGTGCTCCCCTTGCTTAC
ACTGCTCCTCTGGCTTACTCTGCTCCTGCTGCCGTGGTAGCTGCTCCCGC
TCCAGTTGTGACCGCAACCAGTAGCCAGGTTATCGCCAGGAATTACAATG
GAATCGCCTCTGCTCCTGTGATTGCTCCCGTTGCTGCTCCTCTGGCTGCT
CCTGTGGTGGCGAAGTACGCGGCTACTCCTCTGGCTGCTCCTGTGGTGGC
GAAGTACGCGGCTACTCCTCTGGCTGCACGACTGGCCTACTCCTCGCCTT
TGGCTTACTCCGCACCACTGAGCTACGCTGCTGCTCCTGCACCATTTCTC
ATCGCAAGCTTTCTAGACCAT

BO24721.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG32213-RB 390 CG32213-PB 1..387 17..403 1935 100 Plus
825-Oak-RB 390 CG32208-PB 1..387 17..403 1905 99.5 Plus
CG32214-RC 351 CG32214-PC 1..272 17..288 1330 99.3 Plus
CG32213-RB 390 CG32213-PB 217..272 272..327 265 98.2 Plus
CG32213-RB 390 CG32213-PB 256..311 233..288 265 98.2 Plus
825-Oak-RB 390 CG32208-PB 217..272 272..327 265 98.2 Plus
825-Oak-RB 390 CG32208-PB 256..311 233..288 265 98.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32213-RB 526 CG32213-RB 51..438 16..403 1940 100 Plus
825-Oak-RB 514 CG32208-RB 51..438 16..403 1910 99.5 Plus
CG32214-RC 756 CG32214-RC 54..326 16..288 1335 99.3 Plus
CG32213-RB 526 CG32213-RB 268..323 272..327 265 98.2 Plus
CG32213-RB 526 CG32213-RB 307..362 233..288 265 98.2 Plus
825-Oak-RB 514 CG32208-RB 268..323 272..327 265 98.2 Plus
825-Oak-RB 514 CG32208-RB 307..362 233..288 265 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19475961..19476335 29..403 1875 100 Plus
3L 28110227 3L 19471732..19472106 403..29 1845 99.5 Minus
3L 28110227 3L 19467471..19467730 29..288 1270 99.2 Plus
3L 28110227 3L 19472620..19472965 39..378 1060 87.7 Plus
3L 28110227 3L 19475153..19475447 327..39 745 84.4 Minus
3L 28110227 3L 19466728..19466952 245..39 685 88 Minus
3L 28110227 3L 19467675..19467788 272..385 510 96.5 Plus
3L 28110227 3L 19478430..19478568 88..226 485 89.9 Plus
3L 28110227 3L 19423906..19424044 88..226 485 89.9 Plus
3L 28110227 3L 19423106..19423298 247..54 320 78.9 Minus
3L 28110227 3L 19488102..19488245 88..240 280 80.4 Plus
3L 28110227 3L 19488045..19488123 49..127 275 89.9 Plus
3L 28110227 3L 19424757..19424836 141..220 265 88.8 Plus
3L 28110227 3L 19471808..19471863 288..233 265 98.2 Minus
3L 28110227 3L 19471847..19471902 327..272 265 98.2 Minus
3L 28110227 3L 19476165..19476220 272..327 265 98.2 Plus
3L 28110227 3L 19476204..19476259 233..288 265 98.2 Plus
3L 28110227 3L 19423004..19423102 378..279 255 86 Minus
3L 28110227 3L 19475123..19475209 318..232 255 86.2 Minus
3L 28110227 3L 19477672..19477760 403..315 250 85.4 Minus
3L 28110227 3L 19486827..19486933 378..271 250 84.3 Minus
3L 28110227 3L 19472858..19472914 232..288 240 94.7 Plus
3L 28110227 3L 19478373..19478428 49..104 205 91.1 Plus
3L 28110227 3L 19486877..19486968 288..197 205 81.5 Minus
3L 28110227 3L 19423849..19423904 49..104 190 89.3 Plus
Blast to na_te.dros performed 2014-11-28 02:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2777..2891 159..42 151 60.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2999 258..30 143 57.1 Minus

BO24721.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:18 Download gff for BO24721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 57..438 22..405 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:59 Download gff for BO24721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 36..417 22..405 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:18 Download gff for BO24721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 57..438 22..405 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:18 Download gff for BO24721.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19475956..19476335 22..405 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:59 Download gff for BO24721.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19469056..19469435 22..405 98   Plus

BO24721.pep Sequence

Translation from 16 to 421

> BO24721.pep
MFKYAVVVLALVACAAAKPGLLGAPLAYTAPLAYSAPAAVVAAPAPVVTA
TSSQVIARNYNGIASAPVIAPVAAPLAAPVVAKYAATPLAAPVVAKYAAT
PLAARLAYSSPLAYSAPLSYAAAPAPFLIASFLDH

BO24721.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32213-PB 129 CG32213-PB 1..129 1..129 626 100 Plus
825-Oak-PB 129 CG32208-PB 1..129 1..129 623 99.2 Plus
CG12519-PB 131 CG12519-PB 1..131 1..129 525 85.2 Plus
CG12519-PA 131 CG12519-PA 1..131 1..129 525 85.2 Plus
CG32214-PC 116 CG32214-PC 1..116 1..129 520 86.8 Plus