Clone BO24726 Report

Search the DGRC for BO24726

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG13748-RA
Protein status:BO24726.pep: Imported from assembly
Sequenced Size:373

Clone Sequence Records

BO24726.complete Sequence

373 bp assembled on 2010-05-17

GenBank Submission: KX795327

> BO24726.complete
GAAGTTATCAGTCGACATGCGCGGACAACTGAAAGAGTACGTTGGAGTGG
CAGTGGTGCTGATCCTGCTGGCGGGGATCAGATGGAGCGAGGCGTTTCCC
ATGGACCTCTACGACGACGTGAGCGACTTCTTTGACGCCATCTCGCTGGA
CGATGTGGCCAATACCGGGCGCAACACCCATCCGGAGCAGTTCTGCCTCA
TGCCGGCACGCAAGGGCGTCTGCCGCGCCCTGATCCCCCGTTGGCGCTAC
GATCCGGAGCAGAAGAAGTGCGTGGAGTTCAAGTTCGGCGGCTGTGACGG
CAACGAGAACAACTTCGCCAGCTACAAGGACTGCATGTCCACCTGCGAGG
GCATGGCAAGCTTTCTAGACCAT

BO24726.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG13748-RA 342 CG13748-PA 1..339 17..355 1695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13748-RA 722 CG13748-RA 55..393 17..355 1695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8940469..8940807 17..355 1695 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:33:00 has no hits.

BO24726.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:04 Download gff for BO24726.complete
Subject Subject Range Query Range Percent Splice Strand
CG13748-RA 1..339 17..357 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:01 Download gff for BO24726.complete
Subject Subject Range Query Range Percent Splice Strand
CG13748-RA 55..393 17..357 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:27 Download gff for BO24726.complete
Subject Subject Range Query Range Percent Splice Strand
CG13748-RA 55..393 17..357 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:27 Download gff for BO24726.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8940469..8940807 17..357 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:01 Download gff for BO24726.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4827974..4828312 17..357 99   Plus

BO24726.pep Sequence

Translation from 16 to 373

> BO24726.pep
MRGQLKEYVGVAVVLILLAGIRWSEAFPMDLYDDVSDFFDAISLDDVANT
GRNTHPEQFCLMPARKGVCRALIPRWRYDPEQKKCVEFKFGGCDGNENNF
ASYKDCMSTCEGMASFLDH

BO24726.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG13748-PA 113 CG13748-PA 1..113 1..113 620 100 Plus
CG3604-PB 132 CG3604-PB 9..105 8..110 146 35 Plus
CG3604-PA 132 CG3604-PA 9..105 8..110 146 35 Plus
Acp24A4-PC 78 CG31779-PC 23..76 58..110 139 44.4 Plus
Acp24A4-PB 78 CG31779-PB 23..76 58..110 139 44.4 Plus