BO24727.complete Sequence
550 bp assembled on 2010-05-17
GenBank Submission: KX795159
> BO24727.complete
GAAGTTATCAGTCGACATGACAACATCTGCTGTTGAAGCTCCCAATAGTG
CATATCCCGATTTAGAAAAGCGACTGGAAAGGTATTTGCGAAGTGTGTTT
TGCCTAAAGGAAATCGATACTAAAAATGAGTACATTCCAACCGAAGTGGA
GTACTTTGGAGTTCTGAGTTTAAGCGATGTTCGAGCGCCTCGCCGAAAAC
TGTGGTACATGTACTATGCGACAACAGATCAGGTGGACAAAACTGTGGAT
CAGATCCATCGTAAATATGGCCAAAAGAATATGTACGAGCTGTTCAGAAA
ACCGGTATATACAGGGGCTGGAATGCGATCCCGTGTTAAGAACCACTTTA
AAGGGCTTAAGTGGCACGTAAAAGGAAACATTTTGGAAGCCCCGCTAGGT
AGCTCCCTTAATGATGAGAAAGTGGTTAACACAATTGCAGATTTATATCA
GAACGAAAGGAGAAGATACTTCGATTACCTTATGTCTAGGAGTAATCTGT
ATAAATCGTGTACATATCGAAACATAAATGCAGCAAGCTTTCTAGACCAT
BO24727.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33468-RA | 519 | CG33468-PA | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33468-RA | 607 | CG33468-RA | 22..537 | 17..532 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14606377..14606861 | 532..48 | 2425 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:33:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy | 7469 | gypsy DMGYPF1A 7469bp Derived from M12927 (g157583) (Rel. 44, Last updated, Version 6). | 2326..2364 | 108..146 | 105 | 74.4 | Plus |
BO24727.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:05 Download gff for
BO24727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 1..516 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:05 Download gff for
BO24727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 22..537 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:29 Download gff for
BO24727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 22..537 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:29 Download gff for
BO24727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14606375..14606861 | 48..534 | 99 | <- | Minus |
| 2R | 14606929..14606959 | 17..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:05 Download gff for
BO24727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10493880..10494366 | 48..534 | 99 | <- | Minus |
| arm_2R | 10494434..10494464 | 17..47 | 100 | | Minus |
BO24727.pep Sequence
Translation from 16 to 550
> BO24727.pep
MTTSAVEAPNSAYPDLEKRLERYLRSVFCLKEIDTKNEYIPTEVEYFGVL
SLSDVRAPRRKLWYMYYATTDQVDKTVDQIHRKYGQKNMYELFRKPVYTG
AGMRSRVKNHFKGLKWHVKGNILEAPLGSSLNDEKVVNTIADLYQNERRR
YFDYLMSRSNLYKSCTYRNINAASFLDH
BO24727.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33468-PA | 172 | CG33468-PA | 1..172 | 1..172 | 910 | 100 | Plus |
| CG12868-PB | 167 | CG12868-PB | 1..160 | 1..159 | 405 | 47.5 | Plus |
| CG33469-PB | 160 | CG33469-PB | 1..141 | 16..156 | 294 | 36.2 | Plus |
| CG33469-PA | 160 | CG33469-PA | 1..141 | 16..156 | 294 | 36.2 | Plus |
