BO24729.complete Sequence
538 bp assembled on 2010-05-17
GenBank Submission: KX799014
> BO24729.complete
GAAGTTATCAGTCGACATGAGTCAAATACTACGCATGCTTTACTGTCTTC
CCATTTGGCTGCTGCTGCTTTTGCGTGCTGATGAGGCAAACGGTAAGGGC
ATATGCCTGTATTTCAGTGAAAAAACAGCTTCTTGGTTTAGTGCCCTGAC
CATCTGCAAAAGCCTCCACATGTGCTTGGCTGATCTAAACACCGAAGTTA
CCCTATTCCAGATGAAAAGCAAAATAAACCAAGACGACCACGAGTACTGG
TTTGGATTGAATGCACACGATAAGCCCACCTACAGATACGTTTCGAACAA
CAAGTCCATTGAGTACTCGCCGCACAATTCAAAGCTGGTGAACAACGAAG
GATGCGTCTATGTTAAACAGCAAAACGACTTTTTCAAATTTGAATCGGCA
AAGTGTCGCGAACACCGGAGATTCATCTGTACTAAAACCGATGAATGCGA
TGGTGTTAGCATGAAACATGGAAACTCAAAATGCGTCATAACCGCAGAGG
AAAGAGATCTTGTAGCCTACGCAAGCTTTCTAGACCAT
BO24729.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34033-RA | 507 | CG34033-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34033-RA | 566 | CG34033-RA | 7..510 | 17..520 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9820738..9821130 | 128..520 | 1965 | 100 | Plus |
2R | 25286936 | 2R | 9820569..9820680 | 17..128 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:33:21 has no hits.
BO24729.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:06 Download gff for
BO24729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34033-RA | 1..504 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:10 Download gff for
BO24729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34033-RA | 7..510 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:33 Download gff for
BO24729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34033-RA | 7..510 | 17..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:33 Download gff for
BO24729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9820569..9820679 | 17..127 | 100 | -> | Plus |
2R | 9820738..9821130 | 128..522 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:10 Download gff for
BO24729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5708074..5708184 | 17..127 | 100 | -> | Plus |
arm_2R | 5708243..5708635 | 128..522 | 99 | | Plus |
BO24729.pep Sequence
Translation from 16 to 538
> BO24729.pep
MSQILRMLYCLPIWLLLLLRADEANGKGICLYFSEKTASWFSALTICKSL
HMCLADLNTEVTLFQMKSKINQDDHEYWFGLNAHDKPTYRYVSNNKSIEY
SPHNSKLVNNEGCVYVKQQNDFFKFESAKCREHRRFICTKTDECDGVSMK
HGNSKCVITAEERDLVAYASFLDH
BO24729.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34033-PA | 168 | CG34033-PA | 1..168 | 1..168 | 913 | 100 | Plus |