Clone BO24729 Report

Search the DGRC for BO24729

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG34033-RA
Protein status:BO24729.pep: Imported from assembly
Sequenced Size:538

Clone Sequence Records

BO24729.complete Sequence

538 bp assembled on 2010-05-17

GenBank Submission: KX799014

> BO24729.complete
GAAGTTATCAGTCGACATGAGTCAAATACTACGCATGCTTTACTGTCTTC
CCATTTGGCTGCTGCTGCTTTTGCGTGCTGATGAGGCAAACGGTAAGGGC
ATATGCCTGTATTTCAGTGAAAAAACAGCTTCTTGGTTTAGTGCCCTGAC
CATCTGCAAAAGCCTCCACATGTGCTTGGCTGATCTAAACACCGAAGTTA
CCCTATTCCAGATGAAAAGCAAAATAAACCAAGACGACCACGAGTACTGG
TTTGGATTGAATGCACACGATAAGCCCACCTACAGATACGTTTCGAACAA
CAAGTCCATTGAGTACTCGCCGCACAATTCAAAGCTGGTGAACAACGAAG
GATGCGTCTATGTTAAACAGCAAAACGACTTTTTCAAATTTGAATCGGCA
AAGTGTCGCGAACACCGGAGATTCATCTGTACTAAAACCGATGAATGCGA
TGGTGTTAGCATGAAACATGGAAACTCAAAATGCGTCATAACCGCAGAGG
AAAGAGATCTTGTAGCCTACGCAAGCTTTCTAGACCAT

BO24729.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34033-RA 507 CG34033-PA 1..504 17..520 2520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG34033-RA 566 CG34033-RA 7..510 17..520 2520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9820738..9821130 128..520 1965 100 Plus
2R 25286936 2R 9820569..9820680 17..128 560 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:33:21 has no hits.

BO24729.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:06 Download gff for BO24729.complete
Subject Subject Range Query Range Percent Splice Strand
CG34033-RA 1..504 17..522 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:10 Download gff for BO24729.complete
Subject Subject Range Query Range Percent Splice Strand
CG34033-RA 7..510 17..522 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:33 Download gff for BO24729.complete
Subject Subject Range Query Range Percent Splice Strand
CG34033-RA 7..510 17..522 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:33 Download gff for BO24729.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9820569..9820679 17..127 100 -> Plus
2R 9820738..9821130 128..522 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:10 Download gff for BO24729.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5708074..5708184 17..127 100 -> Plus
arm_2R 5708243..5708635 128..522 99   Plus

BO24729.pep Sequence

Translation from 16 to 538

> BO24729.pep
MSQILRMLYCLPIWLLLLLRADEANGKGICLYFSEKTASWFSALTICKSL
HMCLADLNTEVTLFQMKSKINQDDHEYWFGLNAHDKPTYRYVSNNKSIEY
SPHNSKLVNNEGCVYVKQQNDFFKFESAKCREHRRFICTKTDECDGVSMK
HGNSKCVITAEERDLVAYASFLDH

BO24729.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG34033-PA 168 CG34033-PA 1..168 1..168 913 100 Plus