Clone BO24731 Report

Search the DGRC for BO24731

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG17650-RA
Protein status:BO24731.pep: Imported from assembly
Sequenced Size:409

Clone Sequence Records

BO24731.complete Sequence

409 bp assembled on 2010-05-17

GenBank Submission: KX797979

> BO24731.complete
GAAGTTATCAGTCGACATGAGTGATTTGGTAGGTATCGTTTATAATGACT
ATCCCATGGAGAGCGAGGAGGATTTCAATAGGCGCAGGAGGGATCTTGAT
AATATATTTTTCAACTGCAGCACAAGGAAAAATCAGGAACAACAATTCGA
AGCCAAGCGTCCCATACTAAACTCATCGAACTACAATAAGATATTCGGAG
CATCTTTGGGAGATGACATGGACTTCGAGGACTTTCCCGACCTCAACCAA
CCACTGCCAAATATTTCCATTCACGAGCAACTGCGTCTGGCTTCCGGGAA
CCGCGAGATAATCGCGAGCATTCAGCGAAATCACCAAAAGCGACTCGAAA
ACCTTTGGCACTCGGAACTAATAGAAAAACTAGCGCAAGAGGCAAGCTTT
CTAGACCAT

BO24731.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG17650-RA 378 CG17650-PA 1..375 17..391 1875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG17650-RA 534 CG17650-RA 42..416 17..391 1875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1758404..1758660 391..135 1285 100 Minus
2L 23513712 2L 1758932..1759052 137..17 605 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:33:38 has no hits.

BO24731.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:07 Download gff for BO24731.complete
Subject Subject Range Query Range Percent Splice Strand
CG17650-RA 27..401 17..393 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:17 Download gff for BO24731.complete
Subject Subject Range Query Range Percent Splice Strand
CG17650-RA 42..416 17..393 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:39 Download gff for BO24731.complete
Subject Subject Range Query Range Percent Splice Strand
CG17650-RA 42..416 17..393 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:39 Download gff for BO24731.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1758402..1758658 137..393 99 <- Minus
2L 1758933..1759052 17..136 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:17 Download gff for BO24731.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1758402..1758658 137..393 99 <- Minus
arm_2L 1758933..1759052 17..136 100   Minus

BO24731.pep Sequence

Translation from 16 to 409

> BO24731.pep
MSDLVGIVYNDYPMESEEDFNRRRRDLDNIFFNCSTRKNQEQQFEAKRPI
LNSSNYNKIFGASLGDDMDFEDFPDLNQPLPNISIHEQLRLASGNREIIA
SIQRNHQKRLENLWHSELIEKLAQEASFLDH

BO24731.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG17650-PA 125 CG17650-PA 1..125 1..125 655 100 Plus