BO24734.complete Sequence
310 bp assembled on 2010-05-17
GenBank Submission: KX799620
> BO24734.complete
GAAGTTATCAGTCGACATGGCGGCTGCCAACATGGAGAAGGGTGAGCTGA
TGAACCAGGTGAAACAACAGATCGCATTGGCCAATGCCCAGGAGATGCTC
TCGAAGATGACGGAGAAGTGCTTCAAGAAGTGCATCCAGAAGCCGGGAAA
ATCACTGGACTCCACCGAGCAGCGTTGCATTTCGCAGTGCATGGATCGCT
TCATGGACGCCTGGAATCTGGTGTCGCGCACCTATGGCAATCGTCTGCAG
CGTGAACAGTACAGGACCATGGAATCGTTGGAGATGACCAGCGCAAGCTT
TCTAGACCAT
BO24734.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim13-RA | 279 | CG11611-PA | 1..276 | 17..292 | 1380 | 100 | Plus |
CG34132-RA | 255 | CG34132-PA | 17..200 | 33..216 | 260 | 76.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim13-RA | 442 | CG11611-RA | 86..365 | 13..292 | 1385 | 99.6 | Plus |
CG34132-RA | 535 | CG34132-RA | 163..346 | 33..216 | 260 | 76.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11774137..11774416 | 292..13 | 1385 | 99.6 | Minus |
2L | 23513712 | 2L | 7885665..7885781 | 33..149 | 210 | 78.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:35:57 has no hits.
BO24734.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:20 Download gff for
BO24734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim13-RA | 1..276 | 17..294 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:07 Download gff for
BO24734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim13-RA | 90..365 | 17..294 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:24 Download gff for
BO24734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim13-RA | 90..365 | 17..294 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:24 Download gff for
BO24734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11774135..11774412 | 17..294 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:07 Download gff for
BO24734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11767235..11767512 | 17..294 | 99 | | Minus |
BO24734.pep Sequence
Translation from 16 to 310
> BO24734.pep
MAAANMEKGELMNQVKQQIALANAQEMLSKMTEKCFKKCIQKPGKSLDST
EQRCISQCMDRFMDAWNLVSRTYGNRLQREQYRTMESLEMTSASFLDH
BO24734.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim13-PA | 92 | CG11611-PA | 1..92 | 1..92 | 475 | 100 | Plus |
CG34132-PA | 84 | CG34132-PA | 1..81 | 1..81 | 350 | 76.5 | Plus |
CG42302-PA | 121 | CG42302-PA | 8..90 | 12..94 | 190 | 44.6 | Plus |