BO24738.complete Sequence
556 bp assembled on 2010-05-17
GenBank Submission: KX798932
> BO24738.complete
GAAGTTATCAGTCGACATGTATTTCTTCGAGAAGATCAGTGATCAGTTTT
GCCGCGTTGTGCGCACCAACCTAAATATACCACTATCCTTTTGCGAAACA
CGGAACGTCTGGAAATTCTCGAACACTTCCGATACAATGATATTCTTCTT
CACCCTCACCTTTGGTATCCTTCGAGCGTTCTCAAATTTTATAGATTTCA
TGAACCTTTTCTTCGGAGGGATGCGTTTGGGGCGGCCAAGCAATCTCTTG
ATTTTGAGGGGCGAAAATTCGCGCCGCTTTCAAGTCATCAAACACTTTTT
AATGCTGAATGCATGGATATTAGTGATATACGCCATGGTATTTATCAAGC
CGCATTACATGGTTCCCTTCGTTGTGCTTTCGTTGATCATCTTGATCATC
TATGTGTTCGTCGTGGCATTAGATATCCTGCGACATGTCGGGATACCACT
GGACCGCAAGATGATCCTTTCGGAAATGATCCTCAACTTGAGCTGTGTTG
TTTACGTGCAGGGGGTCCTCAAGCAACAGATCTTCTCTGCAAGCTTTCTA
GACCAT
BO24738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33252-RA | 525 | CG33252-PA | 1..522 | 17..538 | 2610 | 100 | Plus |
| CG43075-RA | 525 | CG43075-PA | 8..516 | 24..532 | 1345 | 84.3 | Plus |
| CG32588-RA | 513 | CG32588-PA | 7..324 | 23..355 | 430 | 76 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33252-RA | 819 | CG33252-RA | 94..615 | 17..538 | 2610 | 100 | Plus |
| CG43075-RA | 757 | CG43075-RA | 86..594 | 24..532 | 1345 | 84.3 | Plus |
| CG32588-RA | 677 | CG32588-RA | 88..405 | 23..355 | 430 | 76 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16896419..16896613 | 538..344 | 975 | 100 | Minus |
| X | 23542271 | X | 16896689..16896854 | 343..178 | 830 | 100 | Minus |
| X | 23542271 | X | 16896933..16897094 | 178..17 | 810 | 100 | Minus |
| X | 23542271 | X | 15220694..15220850 | 342..186 | 500 | 87.9 | Minus |
| X | 23542271 | X | 15220434..15220622 | 532..344 | 450 | 82.5 | Minus |
| X | 23542271 | X | 15220939..15221091 | 176..24 | 450 | 86.3 | Minus |
| X | 23542271 | X | 15206397..15206549 | 175..23 | 300 | 79.7 | Minus |
| X | 23542271 | X | 15206169..15206278 | 343..234 | 190 | 78.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:34:05 has no hits.
BO24738.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:10 Download gff for
BO24738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33252-RA | 81..602 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:28 Download gff for
BO24738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33252-RA | 94..615 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:49 Download gff for
BO24738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33252-RA | 94..615 | 17..540 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:49 Download gff for
BO24738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16896417..16896613 | 344..540 | 98 | <- | Minus |
| X | 16896689..16896853 | 179..343 | 100 | <- | Minus |
| X | 16896933..16897094 | 17..178 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:28 Download gff for
BO24738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16790450..16790646 | 344..540 | 98 | <- | Minus |
| arm_X | 16790722..16790886 | 179..343 | 100 | <- | Minus |
| arm_X | 16790966..16791127 | 17..178 | 100 | | Minus |
BO24738.pep Sequence
Translation from 16 to 556
> BO24738.pep
MYFFEKISDQFCRVVRTNLNIPLSFCETRNVWKFSNTSDTMIFFFTLTFG
ILRAFSNFIDFMNLFFGGMRLGRPSNLLILRGENSRRFQVIKHFLMLNAW
ILVIYAMVFIKPHYMVPFVVLSLIILIIYVFVVALDILRHVGIPLDRKMI
LSEMILNLSCVVYVQGVLKQQIFSASFLDH
BO24738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33252-PA | 174 | CG33252-PA | 1..174 | 1..174 | 892 | 100 | Plus |
| CG43075-PA | 174 | CG43075-PA | 1..172 | 1..172 | 633 | 71.5 | Plus |
| CG32588-PA | 170 | CG32588-PA | 1..169 | 1..173 | 420 | 52.3 | Plus |
| CG9030-PB | 210 | CG9030-PB | 1..192 | 1..172 | 212 | 28.4 | Plus |
