Clone BO24742 Report

Search the DGRC for BO24742

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptCG7130-RA
Protein status:BO24742.pep: Imported from assembly
Sequenced Size:418

Clone Sequence Records

BO24742.complete Sequence

418 bp assembled on 2010-05-17

GenBank Submission: KX798584

> BO24742.complete
GAAGTTATCAGTCGACATGGGTAAGGATTACTACAAGATTCTGGGCATCG
AGAGGAATGCGTCCAGCGAAGACGTCAAGAAGGGATACCGCCGGATGGCT
CTCCGCTACCATCCGGACAAGAACGACCATCCGCAGGCCGAGGAGCAGTT
TAGGGAGGTGGTGGCCGCCTTCGAAGTGCTCTTTGATAAGGAAAAGCGCG
AGATATACGACCAGCACGGCGAGGAGGGTCTCAAATGTGATGACGAGCCT
GCTGCGACCTTCGCCCAGCCCACGCCAGACATGCTCCCCTTCATGTGCGC
CGTCGGAGGAACCGTGCTCTTTGCGTTCGCCGCCTACAAGACATTCCAGT
TCTTCAACCGGAAAAAAGAGGCTACCCACGGCGATGGATCCTCCTCGGAC
GCAAGCTTTCTAGACCAT

BO24742.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7130-RA 387 CG7130-PA 1..384 17..400 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7130-RA 701 CG7130-RA 123..506 17..400 1920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22075251..22075634 400..17 1920 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:36:19 has no hits.

BO24742.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:21 Download gff for BO24742.complete
Subject Subject Range Query Range Percent Splice Strand
CG7130-RA 123..506 17..402 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:15 Download gff for BO24742.complete
Subject Subject Range Query Range Percent Splice Strand
CG7130-RA 123..506 17..402 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:30 Download gff for BO24742.complete
Subject Subject Range Query Range Percent Splice Strand
CG7130-RA 123..506 17..402 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:30 Download gff for BO24742.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22075248..22075634 17..402 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:15 Download gff for BO24742.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22068348..22068734 17..402 99   Minus

BO24742.pep Sequence

Translation from 16 to 418

> BO24742.pep
MGKDYYKILGIERNASSEDVKKGYRRMALRYHPDKNDHPQAEEQFREVVA
AFEVLFDKEKREIYDQHGEEGLKCDDEPAATFAQPTPDMLPFMCAVGGTV
LFAFAAYKTFQFFNRKKEATHGDGSSSDASFLDH

BO24742.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7130-PA 128 CG7130-PA 1..128 1..128 684 100 Plus
DnaJ-1-PA 334 CG10578-PA 1..103 1..131 280 47.3 Plus
DnaJ-1-PB 334 CG10578-PB 1..103 1..131 280 47.3 Plus
CG5001-PC 346 CG5001-PC 1..109 1..92 266 48.6 Plus
CG5001-PD 350 CG5001-PD 1..109 1..92 266 48.6 Plus