Clone BO24746 Report

Search the DGRC for BO24746

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG14353-RA
Protein status:BO24746.pep: Imported from assembly
Sequenced Size:1159

Clone Sequence Records

BO24746.complete Sequence

1159 bp assembled on 2010-05-17

GenBank Submission: KX796821

> BO24746.complete
GAAGTTATCAGTCGACATGGACAAGCCCCAGCTTATTGAGCACCTCCACG
AGGCACTCAACTACACGGTGTACGATACGAAATGGGTGCCCCTTTCGGCC
AAGTTTGTGATTCTGGGCTCCAAGGCCAACGGGCACGGAATCATGGACAT
CTACGAACTCAACCAGGATAAGCTGGTGAAAGTGAAGTCCGTAGAGAAGA
AGGTTGCCTTCAAATGCGGCACCTTCGGAGCAGCTTCGCTCAGGAACCGC
CACATGGCCATCGGAGATTTCGAGGGCAGGCTGCAAGTTCTGGATATGGA
GCAGCCGGACCTTCCGGTCTACAATGTAAAGGCCCACAACGGCATCATCA
ACACCATCGACGCGATTGGCGGCACACAAATCGATTGCGGTGCTCCGGAA
ATCGTTACTGGAAGTCGTGACGGCGCCGTTAAAGTCTGGGATATCCGCCA
GGGGCAGGCTCCTGTGGTGGACATGTCGCCGCCGCCGCAAATGGGCGATG
GCGTTAACAACAGCAGTGGCCGCCGGGACTGCTGGGCCGTGGCCTTTGGA
AATACCTACAACGCTGAGGAGCGCATCGTTGCCGCCGGCTATGATAATGG
AGATCTAAAGATATTCGATTTGCGATCCCTTTCCGTACGCTGGGAGGCCA
CCATGAAGAATGGTATCTGTGGACTGGAGTTCGATCGCCGGGACATTCCC
ATGAACAAGCTAGCGGTCACCACTTTGGAGGGCGGTCTCCTTGTCTTCGA
TATGAGAACCCAACATCCGACCAAGGGATTTAGTTACGTGGAGGAACGCA
ACGCCGGACGCAGCGTGGGAACAAATGGCGTGATCAGCGGACCCAAAGCC
ACCGTTTGGGTAGTTCGTCATCTGCCCCAGAATCGGGATCTCTTTCTCAC
GGGCGGCGGAACTGGTTCCATTCGCCTGTGGCAGTACGAGTATCCCGACA
GGAGGGTCATTGATGACTCTGATGGAAACAAGTTGGGAGTTGCTGGAGCC
CTTAATATGCTTAGTGCAGCCACTTTGAGCTCTCAGCCGGTTCACTGCTT
TGACTGGCATCCAGACAAACTGGGCCTAGCCGTCTGTGGAGCATTCGATC
AAAGCGTGCGCGTTTTAATTACCACCAAACTAAACACTTTTGCAAGCTTT
CTAGACCAT

BO24746.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14353-RA 1128 CG14353-PA 1..1125 17..1141 5625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14353-RA 1485 CG14353-RA 112..1236 17..1141 5625 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17908585..17909434 292..1141 4250 100 Plus
3L 28110227 3L 17908254..17908529 17..292 1380 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:36:30 has no hits.

BO24746.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:22 Download gff for BO24746.complete
Subject Subject Range Query Range Percent Splice Strand
CG14353-RA 1..1125 17..1143 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:19 Download gff for BO24746.complete
Subject Subject Range Query Range Percent Splice Strand
CG14353-RA 112..1236 17..1143 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:33 Download gff for BO24746.complete
Subject Subject Range Query Range Percent Splice Strand
CG14353-RA 112..1236 17..1143 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:33 Download gff for BO24746.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17908254..17908528 17..291 100 -> Plus
3L 17908585..17909434 292..1143 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:19 Download gff for BO24746.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17901354..17901628 17..291 100 -> Plus
arm_3L 17901685..17902534 292..1143 99   Plus

BO24746.pep Sequence

Translation from 16 to 1159

> BO24746.pep
MDKPQLIEHLHEALNYTVYDTKWVPLSAKFVILGSKANGHGIMDIYELNQ
DKLVKVKSVEKKVAFKCGTFGAASLRNRHMAIGDFEGRLQVLDMEQPDLP
VYNVKAHNGIINTIDAIGGTQIDCGAPEIVTGSRDGAVKVWDIRQGQAPV
VDMSPPPQMGDGVNNSSGRRDCWAVAFGNTYNAEERIVAAGYDNGDLKIF
DLRSLSVRWEATMKNGICGLEFDRRDIPMNKLAVTTLEGGLLVFDMRTQH
PTKGFSYVEERNAGRSVGTNGVISGPKATVWVVRHLPQNRDLFLTGGGTG
SIRLWQYEYPDRRVIDDSDGNKLGVAGALNMLSAATLSSQPVHCFDWHPD
KLGLAVCGAFDQSVRVLITTKLNTFASFLDH

BO24746.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14353-PA 375 CG14353-PA 1..375 1..375 1987 100 Plus