BO24748.complete Sequence
451 bp assembled on 2010-05-17
GenBank Submission: KX796028
> BO24748.complete
GAAGTTATCAGTCGACATGGCGGACGACAACTGCATTTTCTGCCTAATTT
CCGATGGGCGGATCCCCTCCACTGTTTTGGAAGTCGAAAACGATGACTTT
GTCATCTTCCAGGACATTAAACCCGCTTCCCAGCACCATTACTTAGCAGT
GACAAAAAAGCACTACGCTAGCCTCAAGGATCTTAACAAATCGCACGATT
CTTTGGTGCAGCTCATGGAGAACGCCCTGAAGGATCTTCTGGTGTCCAAG
GGAGTTTCTGTCGATGATGCCCTCTTCGGATTCCATCTGCCGCCGTTTAT
CACGGTGAAGCATCTTCACATGCATGCCATTAGCCCACGCACCCAAATGA
CCTTCCTATCTAAGATGATCTTTAGACCCTCCGTTTGGTTCAAAACCGTC
GACGAGGCGCGTATTTACCTTTCCCAAAAAGAAGCAAGCTTTCTAGACCA
T
BO24748.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34015-RA | 420 | CG34015-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34015-RA | 594 | CG34015-RA | 82..499 | 16..433 | 2090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16447770..16447963 | 399..206 | 970 | 100 | Minus |
| X | 23542271 | X | 16448031..16448221 | 206..16 | 955 | 100 | Minus |
| X | 23542271 | X | 16447663..16447698 | 433..398 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:41 has no hits.
BO24748.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:23 Download gff for
BO24748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34015-RA | 1..417 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:24 Download gff for
BO24748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34015-RA | 83..499 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:37 Download gff for
BO24748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34015-RA | 83..499 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:37 Download gff for
BO24748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16447661..16447698 | 398..435 | 94 | <- | Minus |
| X | 16447772..16447962 | 207..397 | 100 | <- | Minus |
| X | 16448031..16448220 | 17..206 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:24 Download gff for
BO24748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16341694..16341731 | 398..435 | 94 | <- | Minus |
| arm_X | 16341805..16341995 | 207..397 | 100 | <- | Minus |
| arm_X | 16342064..16342253 | 17..206 | 100 | | Minus |
BO24748.pep Sequence
Translation from 16 to 451
> BO24748.pep
MADDNCIFCLISDGRIPSTVLEVENDDFVIFQDIKPASQHHYLAVTKKHY
ASLKDLNKSHDSLVQLMENALKDLLVSKGVSVDDALFGFHLPPFITVKHL
HMHAISPRTQMTFLSKMIFRPSVWFKTVDEARIYLSQKEASFLDH
BO24748.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34015-PA | 139 | CG34015-PA | 1..139 | 1..139 | 724 | 100 | Plus |
| CG15362-PA | 168 | CG15362-PA | 31..167 | 4..139 | 330 | 47.4 | Plus |
