BO24753.complete Sequence
817 bp assembled on 2010-05-17
GenBank Submission: KX797206
> BO24753.complete
GAAGTTATCAGTCGACATGGATTTCAAGAAGCTGAAGAAAATGGAGGAGG
TGGTGCGCATCGGCGGCAAAGGATCTATGCGCCGCAAGCATAAGAGATTC
CCATCCTCGGCTGCGGCCGAGAAGCGCGTGCAAGCCACATTGGCCATGTT
GCCGTTGAAGAATATCGACGAAATCGAGGAGGTGACCATCGAGTTCACCA
ATTCCAGTAAGGTTGTGTTAACCATGCCCAGGGTTCAGAGCACCGCTGGC
AATTCTTTCTTCGTGGTTAGTGGCGATTTCGTGCGCAAGTCGTCAACAGC
TGGCCCATCGAAAGTGGCCAAGGCAGCCAATGCGCCCAAGGCACCCATGC
CACCTAAGCCACCCAAGCCGGAAGCTTTTTCCGACAAAAAGCCAGAATCA
GAGGAGTCCATTAAGGTGGCCAAGAAGCCCAAGAAGCCGCGCAATCGTGT
TCGTCCTCGCAACAAGAAGGTCCAAATGATGCTCTCCAAAAACAAAGAGG
ACGCAGCCATGGCTGGCTGGGATTCGGAGCCGAAGCTTAGCAATGGTAAA
CCAATTTTGATCTCCTCTGAAGATGGCAGCGATCCGGATAATGAGAAGGT
GCCATCGGATGAGTCTGATGTGGATCGGACCATAGTCTGCGACAAAGATT
CGCTGGGAAGCTTCGGCGATGATTCCGACGGCAAGGAGGACGTTGACACT
ACGGAGTCGATCTACCTGTCCTCCTACTCCAATTACTATTATTTGACGGA
GCAGCTCTATCCAAATACTTATCGCGTTCAGGTCTCAGAGGACGAAGATG
CAAGCTTTCTAGACCAT
BO24753.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes1-RA | 786 | CG13402-PA | 1..783 | 17..799 | 3915 | 100 | Plus |
| betaNACtes3-RA | 789 | CG32601-PA | 1..786 | 17..799 | 2920 | 91.7 | Plus |
| betaNACtes6-RA | 789 | CG32598-PA | 1..786 | 17..799 | 2875 | 91.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes1-RA | 1084 | CG13402-RA | 101..883 | 17..799 | 3915 | 100 | Plus |
| betaNACtes3-RA | 967 | CG32601-RA | 118..903 | 17..799 | 2920 | 91.7 | Plus |
| betaNACtes6-RA | 967 | CG32598-RA | 118..903 | 17..799 | 2875 | 91.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14171688..14172470 | 799..17 | 3915 | 100 | Minus |
| X | 23542271 | X | 14378977..14379762 | 17..799 | 2920 | 91.7 | Plus |
| X | 23542271 | X | 14316194..14316979 | 799..17 | 2875 | 91.3 | Minus |
| X | 23542271 | X | 14380865..14381352 | 318..799 | 1650 | 90.2 | Plus |
| X | 23542271 | X | 14314705..14315021 | 799..486 | 1130 | 91.2 | Minus |
| X | 23542271 | X | 14380507..14380860 | 17..367 | 955 | 85.3 | Plus |
| X | 23542271 | X | 14315096..14315412 | 330..17 | 830 | 84.9 | Minus |
| X | 23542271 | X | 15576746..15576921 | 507..684 | 355 | 82.1 | Plus |
| X | 23542271 | X | 14315018..14315117 | 432..336 | 255 | 86 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:37:19 has no hits.
BO24753.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:31 Download gff for
BO24753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13402-RA | 1..783 | 17..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:40 Download gff for
BO24753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaNACtes1-RA | 101..883 | 17..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:51 Download gff for
BO24753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaNACtes1-RA | 101..883 | 17..801 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:51 Download gff for
BO24753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14171686..14172470 | 17..801 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:40 Download gff for
BO24753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14065719..14066503 | 17..801 | 99 | | Minus |
BO24753.pep Sequence
Translation from 16 to 817
> BO24753.pep
MDFKKLKKMEEVVRIGGKGSMRRKHKRFPSSAAAEKRVQATLAMLPLKNI
DEIEEVTIEFTNSSKVVLTMPRVQSTAGNSFFVVSGDFVRKSSTAGPSKV
AKAANAPKAPMPPKPPKPEAFSDKKPESEESIKVAKKPKKPRNRVRPRNK
KVQMMLSKNKEDAAMAGWDSEPKLSNGKPILISSEDGSDPDNEKVPSDES
DVDRTIVCDKDSLGSFGDDSDGKEDVDTTESIYLSSYSNYYYLTEQLYPN
TYRVQVSEDEDASFLDH
BO24753.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes1-PA | 261 | CG13402-PA | 1..261 | 1..261 | 1336 | 100 | Plus |
| betaNACtes3-PA | 262 | CG32601-PA | 1..262 | 1..261 | 1137 | 87 | Plus |
| betaNACtes6-PA | 262 | CG32598-PA | 1..262 | 1..261 | 1113 | 85.9 | Plus |
| betaNACtes4-PA | 263 | CG18313-PA | 1..261 | 1..241 | 932 | 75.1 | Plus |
| betaNACtes2-PA | 197 | CG18157-PA | 1..197 | 1..223 | 700 | 68 | Plus |
