BO24754.complete Sequence
1201 bp assembled on 2010-05-17
GenBank Submission: KX796001
> BO24754.complete
GAAGTTATCAGTCGACATGCTTTGTTACCGAGAGTGTCAAAAAATATTGG
AAAATGCACAAGAAAGTGCCGTTAGAGTCAAGCTGTTGGACTACCATTTA
GTCAGGGATCTCAGTGCGATCGGTTACCTGGGGGATTACTACGCACTGAC
GCTAAGATATTGCCATGAGGAAGAAGAAATCATTAGGGAAATTGAACTTT
TTGTAAAGGCTATGCCCCAGCAAAGTGCGGAATTGTCCAAAGAAAGTATT
TTCCAAAAGGAATCCTGGCTCTACGACACTCTTATAAAAAAACTGCAAGC
TCTTTCCAACGTAAAGTGGAGTCCAAATTGCGTTTACAGCCGAAAAGACC
TAATGGTACTGGAGAACATTAAGCTAAAGGGTTTCACATCAGCTGGATCC
GCGGAACTCAATGAGGTTTTCGTGAAACCATTAATTAAATCAATTGCCGC
ATTTCATTCTGCCAGTTTGGTCTACGAACATCAGACAAAAACCAATATAG
GTCACACCTATGGTGATAACTTGTTAGAGATCACAGTAGACTCTGAAATT
GCCTGGTTCACTACAGGACTCTCGGCTGTTCTAGCTGTCGTTCGAAGTCT
TGCAAAGTATCAGGGAAATAGGGAGCAATCTTTCATCGGTGACAAACTTA
TGGGCATAATGGAGACAATCTACGAGCAAGCGGCACCTTCAAAAAAATAC
AGGAATGTCCTCTGTCATCGAGATATTTGGGCTGGTAACATTTTCTTTCC
CCCGGAAAATTCTGGGCCTGCTTTACTGATTGATTTTCAGACTTGCCGTT
ACGCTCCCCCAGCATCCGACCTCAATTTTTGTCTTTACATGAATTTGAGC
TCCAGCAAACGCAAGCAAATGGAGAAGCAAGGCATTGATTTATACCACAC
ATATTTGCTGCAGAACCTTTCGGATTTGGGCCTTGAGGAACTAGTGATTT
CTAAGTCAGAGCTGCTGGAATCCTACGAAGAGTTTCGGTTATTCGGAGTG
GTCTACAGAGCGGTAGCTGCTACGGTCGTAAAGGTCCCCACCGACTTCAT
AACCAACGATTTTAAGTATGTGGACCGCAGTAAGGTGATCCTTTCTTACA
TGAAAACAAACCCAGAATTCGCTACATATATGGAGGAGTGCTGTGTGGAT
GTCATGGAAATGGCCTTGGCCAGGGCGAACATGGCAAGCTTTCTAGACCA
T
BO24754.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33509-RA | 1170 | CG33509-PA | 1..1167 | 17..1183 | 5835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33509-RA | 1405 | CG33509-RA | 133..1299 | 17..1183 | 5835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21084711..21085588 | 1183..306 | 4390 | 100 | Minus |
2L | 23513712 | 2L | 21086224..21086374 | 167..17 | 755 | 100 | Minus |
2L | 23513712 | 2L | 21085643..21085781 | 305..167 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:37:30 has no hits.
BO24754.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:33 Download gff for
BO24754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33509-RA | 133..1299 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:44 Download gff for
BO24754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33509-RA | 133..1299 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:56 Download gff for
BO24754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33509-RA | 133..1299 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:56 Download gff for
BO24754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21084708..21085588 | 306..1185 | 99 | <- | Minus |
2L | 21085643..21085781 | 167..305 | 100 | <- | Minus |
2L | 21086225..21086374 | 17..166 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:44 Download gff for
BO24754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21085643..21085781 | 167..305 | 100 | <- | Minus |
arm_2L | 21086225..21086374 | 17..166 | 100 | | Minus |
arm_2L | 21084708..21085588 | 306..1185 | 99 | <- | Minus |
BO24754.pep Sequence
Translation from 16 to 1201
> BO24754.pep
MLCYRECQKILENAQESAVRVKLLDYHLVRDLSAIGYLGDYYALTLRYCH
EEEEIIREIELFVKAMPQQSAELSKESIFQKESWLYDTLIKKLQALSNVK
WSPNCVYSRKDLMVLENIKLKGFTSAGSAELNEVFVKPLIKSIAAFHSAS
LVYEHQTKTNIGHTYGDNLLEITVDSEIAWFTTGLSAVLAVVRSLAKYQG
NREQSFIGDKLMGIMETIYEQAAPSKKYRNVLCHRDIWAGNIFFPPENSG
PALLIDFQTCRYAPPASDLNFCLYMNLSSSKRKQMEKQGIDLYHTYLLQN
LSDLGLEELVISKSELLESYEEFRLFGVVYRAVAATVVKVPTDFITNDFK
YVDRSKVILSYMKTNPEFATYMEECCVDVMEMALARANMASFLDH
BO24754.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33509-PA | 389 | CG33509-PA | 1..389 | 1..389 | 2004 | 100 | Plus |
CG33510-PB | 426 | CG33510-PB | 23..420 | 6..382 | 613 | 35.3 | Plus |
CG33511-PB | 415 | CG33511-PB | 40..392 | 35..368 | 419 | 29.2 | Plus |
CG9259-PC | 422 | CG9259-PC | 16..416 | 7..381 | 256 | 23.8 | Plus |
CG9259-PB | 422 | CG9259-PB | 16..416 | 7..381 | 256 | 23.8 | Plus |