BO24755.complete Sequence
667 bp assembled on 2010-05-17
GenBank Submission: KX799109
> BO24755.complete
GAAGTTATCAGTCGACATGCCGCTAAAATTCGATGATATTCACGAGAAAA
TTGAAACCGGCGTCTACCAATTGGCTGTTAATGACAAAAGCACACGGAGC
ACTGTGTGGCGGGTGTATCGCAAGATCAAGAAGGACGATGGTAGCTTTCT
GGAGCACGTACTGTTCTGCATCGGCTGCAGGAGCATTATGTCCTTCACCC
ACAAATCCACAACGAACCTGAGGCGTCACCGGTGTCACCTGCAGTATCTC
AAGAAACAGGCATTCTGCTGCTACAATTCCAAGGGCGAATCCAACGACAG
AAAGGAGGAGACGGACCAGGAGCATCATGAGGAACATGATGACCAACAAT
CCATGTCGGATGAGTTGGAAACAAAACCCTCTCCTGCCGATGTTGCCGCC
TTTGTGGGGGAAGCGGTCAGCGGCGGAGATTCCACTGCAGCTTCAGCCCG
TATTCCGGACATTCCCGAGATCGCGCTACCACTCGACGCAAGTGGGGTCG
AGGAGTCCAATGTTTATGCACAGACCTGGTCCCTTGAGTACCGCAAACTC
AGCGAGGACCAAAAATTCTATGCCAAAAAAGCTATAGACGAAATCTTCGT
ATTGGGCAGGCTACGACGCCTTACTCTGAATACGGTTCCAACGGCGGAGG
CAAGCTTTCTAGACCAT
BO24755.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34116-RA | 636 | CG34116-PA | 1..633 | 17..649 | 3165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34116-RA | 796 | CG34116-RA | 34..666 | 17..649 | 3165 | 100 | Plus |
| CG15881-RB | 1642 | CG15881-RB | 191..823 | 649..17 | 3165 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19805371..19806003 | 649..17 | 3165 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:37:40 has no hits.
BO24755.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:34 Download gff for
BO24755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34116-RA | 1..633 | 17..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:48 Download gff for
BO24755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34116-RA | 34..666 | 17..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:00 Download gff for
BO24755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15881-RB | 189..823 | 17..651 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:00 Download gff for
BO24755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19805369..19806003 | 17..651 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:48 Download gff for
BO24755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19798469..19799103 | 17..651 | 99 | | Minus |
BO24755.pep Sequence
Translation from 16 to 667
> BO24755.pep
MPLKFDDIHEKIETGVYQLAVNDKSTRSTVWRVYRKIKKDDGSFLEHVLF
CIGCRSIMSFTHKSTTNLRRHRCHLQYLKKQAFCCYNSKGESNDRKEETD
QEHHEEHDDQQSMSDELETKPSPADVAAFVGEAVSGGDSTAASARIPDIP
EIALPLDASGVEESNVYAQTWSLEYRKLSEDQKFYAKKAIDEIFVLGRLR
RLTLNTVPTAEASFLDH
BO24755.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34116-PA | 211 | CG34116-PA | 1..211 | 1..211 | 1107 | 100 | Plus |
| CG11560-PA | 303 | CG11560-PA | 27..122 | 7..123 | 184 | 36.8 | Plus |
| CG11560-PA | 303 | CG11560-PA | 195..296 | 99..207 | 162 | 33.9 | Plus |
| ssp-PA | 368 | CG17153-PA | 19..91 | 8..84 | 156 | 39.7 | Plus |
