BO24765.complete Sequence
787 bp assembled on 2010-05-17
GenBank Submission: KX798338
> BO24765.complete
GAAGTTATCAGTCGACATGGCCCGTTTCTTCGATTCCCGCACCACGATCT
TTTCACCGGAGGGCCGCCTCTATCAGGTGGAGTATGCGATGGAGGCCGCT
TCGCAGTCGGGCACATGCGTGGGACTCCTGGCTAAGAACGGAGTCCTGTT
GGCCACTGAACGAAGCGTTGACAAGCTCATGGACACCAGTATTCCTGTGC
CAAGAATCTCGTGGTTGAACGAGAACATTGCCTGTTGCGCCACGGGCAAC
ACGGCGGATGGTAACGTGCTGGTTAACCAACTGCGAATGATCGCCCAACA
ATATCAGTTCAACTTCGGTGAGATGATTCCTTGCGAGCAGTTGGTCACGA
ACCTTTGCGATATCAAACAGGCGTATACGCAATATGGTGGCAAACGACCC
TTCGGGGTATCGTTTCTTTACATGGGCTGGGATTGCCGCTTCGGGTTTCA
GTTGTATCAGTCCGATCCCAGTGGAAACTACAGTGGCTGGAAGGCCACCT
GCATTGGCCGCAAGTCAGGGGCAGCCATGGAAATGCTTCAGAAGGAACTA
TTTAGCAAGGGCTACGTAAGTCCTTCGGTCGAGGAGGCCAAGGATGTAGC
CATCAAGGTCATGGGCATGACCTTGGGCAGAGATAGCTTGACCCCCGAAA
AACTGGAAATTGCTTTCGTACAGCGTTACGGTAACACCACCGTCTTTCAT
ATTTTAGAAAAAAACGAGATCCACCGGCTAATCGAAAGGAATAACAATTT
GAAGAGGCGCGTCGGGTCGGCAAGCTTTCTAGACCAT
BO24765.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:31:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha3T-RA | 756 | CG1736-PA | 1..753 | 17..769 | 3765 | 100 | Plus |
Prosalpha3-RA | 795 | CG9327-PA | 266..495 | 279..508 | 370 | 77.4 | Plus |
Prosalpha3-RA | 795 | CG9327-PA | 16..137 | 32..153 | 235 | 79.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha3T-RA | 889 | CG1736-RA | 35..787 | 17..769 | 3765 | 100 | Plus |
Prosalpha3-RA | 973 | CG9327-RA | 357..586 | 279..508 | 370 | 77.4 | Plus |
Prosalpha3-RA | 973 | CG9327-RA | 107..228 | 32..153 | 235 | 79.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31122629..31123381 | 769..17 | 3765 | 100 | Minus |
2R | 25286936 | 2R | 20995502..20995731 | 279..508 | 370 | 77.4 | Plus |
2R | 25286936 | 2R | 20995115..20995236 | 32..153 | 235 | 79.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:31:02 has no hits.
BO24765.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:54 Download gff for
BO24765.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha3T-RA | 137..889 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:18 Download gff for
BO24765.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha3T-RA | 137..889 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:52 Download gff for
BO24765.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha3T-RA | 35..787 | 17..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:52 Download gff for
BO24765.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31122627..31123381 | 17..771 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:18 Download gff for
BO24765.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26948349..26949103 | 17..771 | 99 | | Minus |
BO24765.pep Sequence
Translation from 16 to 787
> BO24765.pep
MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERS
VDKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNF
GEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSD
PSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMG
MTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIERNNNLKRRVG
SASFLDH
BO24765.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha3T-PA | 251 | CG1736-PA | 1..251 | 1..251 | 1315 | 100 | Plus |
Prosalpha3-PA | 264 | CG9327-PA | 1..253 | 1..252 | 831 | 61.7 | Plus |
Prosalpha2-PA | 234 | CG5266-PA | 11..176 | 10..176 | 326 | 43.1 | Plus |
Prosalpha4T1-PA | 249 | CG17268-PA | 1..243 | 1..248 | 320 | 31 | Plus |
Prosalpha1-PB | 244 | CG18495-PB | 9..233 | 5..235 | 316 | 34.9 | Plus |