Clone BO24766 Report

Search the DGRC for BO24766

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG13484-RA
Protein status:BO24766.pep: Imported from assembly
Sequenced Size:487

Clone Sequence Records

BO24766.complete Sequence

487 bp assembled on 2010-05-17

GenBank Submission: KX795057

> BO24766.complete
GAAGTTATCAGTCGACATGAGCACCCCTCGCAAGAACTATAACAACCTGC
CGCCCTACTGCCCACAAGGCGGCCAGTACCCATCGCAGTCCGCGGATTAC
AGAGCGCAGCAATTCGGTGGCCAGCAGAAGCCACAAAATCCAAACGTTGG
CTTCTACGAGGACAAACAGGGCCAGCAAAATGTTCCTCATTTCTACCAGA
ACAAATCCCCACAGGAGCCGCAGCGCCATCGGCCCTACGGTCAGGGCAGG
AATTTCGGACGCGGCGGCAGCTTCAATCGCAGGAACCAACAGAACTGGGA
TCATCCGAGGAGCCACCAGAACAGGGAACAAAACCAGAGCGGCAGCTCCT
TCGGCCAGTACTTTCATCCCTCCATGCTGGAGGATCCTTGGCGGGAGCTA
ATGGAACGGCACGAGGCCATCCACGGACCCAGTACTAGCCGAACTTCACC
GAAAGAGGTGGCGGCTTCCGCAAGCTTTCTAGACCAT

BO24766.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:31:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13484-RA 456 CG13484-PA 1..453 17..469 2265 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13484-RA 652 CG13484-RA 83..536 16..469 2270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14052544..14052997 469..16 2270 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:31:14 has no hits.

BO24766.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:55 Download gff for BO24766.complete
Subject Subject Range Query Range Percent Splice Strand
CG13484-RA 1..453 17..471 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:23 Download gff for BO24766.complete
Subject Subject Range Query Range Percent Splice Strand
CG13484-RA 84..536 17..471 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:56 Download gff for BO24766.complete
Subject Subject Range Query Range Percent Splice Strand
CG13484-RA 84..536 17..471 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:56 Download gff for BO24766.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14052542..14052996 17..471 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:23 Download gff for BO24766.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14045642..14046096 17..471 99   Minus

BO24766.pep Sequence

Translation from 16 to 487

> BO24766.pep
MSTPRKNYNNLPPYCPQGGQYPSQSADYRAQQFGGQQKPQNPNVGFYEDK
QGQQNVPHFYQNKSPQEPQRHRPYGQGRNFGRGGSFNRRNQQNWDHPRSH
QNREQNQSGSSFGQYFHPSMLEDPWRELMERHEAIHGPSTSRTSPKEVAA
SASFLDH

BO24766.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13484-PA 151 CG13484-PA 1..151 1..151 852 100 Plus