BO24767.complete Sequence
508 bp assembled on 2010-05-17
GenBank Submission: KX795741
> BO24767.complete
GAAGTTATCAGTCGACATGTCGCATGGGAATAAGCAAAATTTCACCAAGA
TCTGGGATCTTGGAAAGTGGGAATCGCGGGATATAAAGCATTACAGCACA
ATATCGCGAATCCAAAAACAACTACGTCTCGGAAACTGGGAATATCTCTG
TCAGCATCCAGAGATACGGGCCATAATTCGTGTTATCCTTCATCAGGCAC
TCAATGGAAAACCGAAGCCGGAAAATCTCCGAAAATTTGTTGCTGATTTG
TTCAACTGCGCACAGAATCCGCTGCTAGTGCCTATGATTAACACACAGCT
GAAGTACGTTAAGAACGAATTGAAACGTGGCCGCTGGAGTCAGTTCGACG
CCGAGATGCTCTTCATGGAGAGTCCATCGACGCACTCACTCCTCTCGACG
GCATCCGAGGATAGCAATGTCCATCCGGTGCTTACATATGCGCTGGTCTT
CAAGAAACCCGATGAGTGCGGCATCGACAAGCCGCCGTTCGCAAGCTTTC
TAGACCAT
BO24767.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34012-RA | 477 | CG34012-PA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34012-RA | 551 | CG34012-RA | 31..504 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11108867..11109071 | 490..286 | 1025 | 100 | Minus |
3L | 28110227 | 3L | 11109329..11109475 | 163..17 | 735 | 100 | Minus |
3L | 28110227 | 3L | 11109144..11109268 | 286..162 | 625 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:31:19 has no hits.
BO24767.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:56 Download gff for
BO24767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34012-RA | 1..474 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:25 Download gff for
BO24767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34012-RA | 31..504 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:58 Download gff for
BO24767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34012-RA | 31..504 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:58 Download gff for
BO24767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11108863..11109070 | 287..492 | 99 | <- | Minus |
3L | 11109144..11109266 | 164..286 | 100 | <- | Minus |
3L | 11109329..11109475 | 17..163 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:25 Download gff for
BO24767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11102429..11102575 | 17..163 | 100 | | Minus |
arm_3L | 11101963..11102170 | 287..492 | 99 | <- | Minus |
arm_3L | 11102244..11102366 | 164..286 | 100 | <- | Minus |
BO24767.pep Sequence
Translation from 16 to 508
> BO24767.pep
MSHGNKQNFTKIWDLGKWESRDIKHYSTISRIQKQLRLGNWEYLCQHPEI
RAIIRVILHQALNGKPKPENLRKFVADLFNCAQNPLLVPMINTQLKYVKN
ELKRGRWSQFDAEMLFMESPSTHSLLSTASEDSNVHPVLTYALVFKKPDE
CGIDKPPFASFLDH
BO24767.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34012-PA | 158 | CG34012-PA | 1..158 | 1..158 | 850 | 100 | Plus |
CG34021-PA | 161 | CG34021-PA | 30..128 | 24..124 | 199 | 42.6 | Plus |