Clone BO24767 Report

Search the DGRC for BO24767

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG34012-RA
Protein status:BO24767.pep: Imported from assembly
Sequenced Size:508

Clone Sequence Records

BO24767.complete Sequence

508 bp assembled on 2010-05-17

GenBank Submission: KX795741

> BO24767.complete
GAAGTTATCAGTCGACATGTCGCATGGGAATAAGCAAAATTTCACCAAGA
TCTGGGATCTTGGAAAGTGGGAATCGCGGGATATAAAGCATTACAGCACA
ATATCGCGAATCCAAAAACAACTACGTCTCGGAAACTGGGAATATCTCTG
TCAGCATCCAGAGATACGGGCCATAATTCGTGTTATCCTTCATCAGGCAC
TCAATGGAAAACCGAAGCCGGAAAATCTCCGAAAATTTGTTGCTGATTTG
TTCAACTGCGCACAGAATCCGCTGCTAGTGCCTATGATTAACACACAGCT
GAAGTACGTTAAGAACGAATTGAAACGTGGCCGCTGGAGTCAGTTCGACG
CCGAGATGCTCTTCATGGAGAGTCCATCGACGCACTCACTCCTCTCGACG
GCATCCGAGGATAGCAATGTCCATCCGGTGCTTACATATGCGCTGGTCTT
CAAGAAACCCGATGAGTGCGGCATCGACAAGCCGCCGTTCGCAAGCTTTC
TAGACCAT

BO24767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:31:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG34012-RA 477 CG34012-PA 1..474 17..490 2370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG34012-RA 551 CG34012-RA 31..504 17..490 2370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11108867..11109071 490..286 1025 100 Minus
3L 28110227 3L 11109329..11109475 163..17 735 100 Minus
3L 28110227 3L 11109144..11109268 286..162 625 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:31:19 has no hits.

BO24767.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:56 Download gff for BO24767.complete
Subject Subject Range Query Range Percent Splice Strand
CG34012-RA 1..474 17..492 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:25 Download gff for BO24767.complete
Subject Subject Range Query Range Percent Splice Strand
CG34012-RA 31..504 17..492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:58 Download gff for BO24767.complete
Subject Subject Range Query Range Percent Splice Strand
CG34012-RA 31..504 17..492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:58 Download gff for BO24767.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11108863..11109070 287..492 99 <- Minus
3L 11109144..11109266 164..286 100 <- Minus
3L 11109329..11109475 17..163 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:25 Download gff for BO24767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11102429..11102575 17..163 100   Minus
arm_3L 11101963..11102170 287..492 99 <- Minus
arm_3L 11102244..11102366 164..286 100 <- Minus

BO24767.pep Sequence

Translation from 16 to 508

> BO24767.pep
MSHGNKQNFTKIWDLGKWESRDIKHYSTISRIQKQLRLGNWEYLCQHPEI
RAIIRVILHQALNGKPKPENLRKFVADLFNCAQNPLLVPMINTQLKYVKN
ELKRGRWSQFDAEMLFMESPSTHSLLSTASEDSNVHPVLTYALVFKKPDE
CGIDKPPFASFLDH

BO24767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG34012-PA 158 CG34012-PA 1..158 1..158 850 100 Plus
CG34021-PA 161 CG34021-PA 30..128 24..124 199 42.6 Plus