Clone BO24768 Report

Search the DGRC for BO24768

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptAcyp-RA
Protein status:BO24768.pep: Imported from assembly
Sequenced Size:394

Clone Sequence Records

BO24768.complete Sequence

394 bp assembled on 2010-05-17

GenBank Submission: KX797362

> BO24768.complete
GAAGTTATCAGTCGACATGGCGACCCATAATGTCCATTCCTGCGAATTCG
AGGTATTTGGCCGCGTGCAGGGCGTCAACTTCCGGCGACACGCCCTGCGA
AAGGCCAAGACACTGGGTCTTCGCGGCTGGTGCATGAACTCCAGCAGGGG
CACCGTGAAGGGTTACATCGAAGGTCGTCCGGCCGAGATGGATGTGATGA
AGGAGTGGCTCAGGACGACGGGCAGTCCGCTGTCCAGCATCGAGAAGGTG
GAGTTCAGTTCTCAGCGTGAGCGCGATCGCTATGGCTATGCCAACTTTCA
TATCAAGCCCGATCCGCACGAGAATCGCCCAGTTCATGAAGGATTGGGCA
GTAGTTCCAGCCACCATGATAGCAATGCAAGCTTTCTAGACCAT

BO24768.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
Acyp-RB 363 CG16870-PB 1..360 17..376 1800 100 Plus
Acyp-RA 363 CG16870-PA 1..360 17..376 1800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:33
Subject Length Description Subject Range Query Range Score Percent Strand
Acyp-RB 570 CG16870-RB 119..478 17..376 1800 100 Plus
Acyp-RA 514 CG16870-RA 119..478 17..376 1800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13912201..13912560 17..376 1800 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:31:30 has no hits.

BO24768.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:56 Download gff for BO24768.complete
Subject Subject Range Query Range Percent Splice Strand
Acyp-RA 1..360 17..378 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:29 Download gff for BO24768.complete
Subject Subject Range Query Range Percent Splice Strand
Acyp-RA 119..478 17..378 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:01 Download gff for BO24768.complete
Subject Subject Range Query Range Percent Splice Strand
Acyp-RA 119..478 17..378 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:01 Download gff for BO24768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13912201..13912560 17..378 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:29 Download gff for BO24768.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13912201..13912560 17..378 99   Plus

BO24768.pep Sequence

Translation from 16 to 394

> BO24768.pep
MATHNVHSCEFEVFGRVQGVNFRRHALRKAKTLGLRGWCMNSSRGTVKGY
IEGRPAEMDVMKEWLRTTGSPLSSIEKVEFSSQRERDRYGYANFHIKPDP
HENRPVHEGLGSSSSHHDSNASFLDH

BO24768.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
Acyp-PB 120 CG16870-PB 1..120 1..120 651 100 Plus
Acyp-PA 120 CG16870-PA 1..120 1..120 651 100 Plus
CG11052-PD 149 CG11052-PD 56..149 6..99 240 48.9 Plus
CG11052-PC 149 CG11052-PC 56..149 6..99 240 48.9 Plus
CG11052-PB 149 CG11052-PB 56..149 6..99 240 48.9 Plus