BO24769.complete Sequence
400 bp assembled on 2010-05-17
GenBank Submission: KX797202
> BO24769.complete
GAAGTTATCAGTCGACATGCACTTGACATCCACGCTGATTGGACTCCTTA
TCTGCGGTCTGGGGATCGAGCTGCCCACGCGCACTGCCGCACAATTCTGG
TCGGTGGATCCTGTTACGCAGTGGCGAAAAGAGGCTCTGGCCGAGAGGGG
ATCCGGCATCTGTTACAGGACGCTCACCGTGGAAACCATCAATCCCAACT
CCAGAAATCGTCAGTTCTCCTACTGCTGCGATGGTTATGTGAATAAGGGA
ACAAGCCAGAACCTGAAGTGCGAGCCCATTTGCTCGGAGGACTGCTCCAA
TGGATTGTGCCTGGCGCCCGAGGAGTGCGAGTGTGCTCCGGGTTACTATC
GGAGTAACAAAAGGTGTCGTTTTGTCTTGGAAGCAAGCTTTCTAGACCAT
BO24769.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimB3-RA | 369 | CG34003-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimB3-RA | 466 | CG34003-RA | 71..440 | 13..382 | 1835 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13967490..13967694 | 382..178 | 1025 | 100 | Minus |
| 2L | 23513712 | 2L | 13967751..13967915 | 177..13 | 810 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:31:43 has no hits.
BO24769.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:57 Download gff for
BO24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nimB3-RA | 1..366 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:32 Download gff for
BO24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimB3-RA | 75..440 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:04 Download gff for
BO24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimB3-RA | 75..440 | 17..384 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:04 Download gff for
BO24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13967488..13967694 | 178..384 | 99 | <- | Minus |
| 2L | 13967751..13967911 | 17..177 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:32 Download gff for
BO24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13967488..13967694 | 178..384 | 99 | <- | Minus |
| arm_2L | 13967751..13967911 | 17..177 | 100 | | Minus |
BO24769.pep Sequence
Translation from 16 to 400
> BO24769.pep
MHLTSTLIGLLICGLGIELPTRTAAQFWSVDPVTQWRKEALAERGSGICY
RTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCSNGLCLA
PEECECAPGYYRSNKRCRFVLEASFLDH
BO24769.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimB3-PA | 122 | CG34003-PA | 1..122 | 1..122 | 675 | 100 | Plus |
| NimB2-PA | 421 | CG31839-PA | 132..209 | 46..113 | 160 | 36.7 | Plus |
