Clone BO24771 Report

Search the DGRC for BO24771

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:71
Vector:pDNR-Dual
Associated Gene/TranscriptCG14313-RA
Protein status:BO24771.pep: Imported from assembly
Sequenced Size:439

Clone Sequence Records

BO24771.complete Sequence

439 bp assembled on 2010-05-17

GenBank Submission: KX795834

> BO24771.complete
GAAGTTATCAGTCGACATGGGTCTGATGCGGACAGTTGGCGGCGCCAGCG
ATGCACAGCTGCCGGAGGAGGCGGTGTCTACGCTCAATCATTGCCCGACC
TACCGACAGATTCCAGGTGCCGGAACGGGCGCAGGATCAGCGCCAGCCAA
GCGAGTACCCGTCCTGTTTTCCACCAACCGTGGACTCTATCTGCGCCTGG
CCCAACCACTGGCAGATCAGATGGAGGTGATGACACTGCAGCCAAGCGGA
CAGAACTACAACATCAGCTTCTGCGATCTGGAGCGCTGGAGCACCAATCG
GGCGAATGTGGTCAGCCTGGAGGACACCTTTAGCATCATGCAGCAGCGCA
ATATGTCGCCGGAGTCTATGAACTACCAGCCACGCCTGTGGAAGAACAAC
GTCAGCTACAGCCTGATGCACGCAAGCTTTCTAGACCAT

BO24771.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14313-RA 408 CG14313-PA 1..405 17..421 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14313-RA 652 CG14313-RA 164..569 16..421 2030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18191531..18191804 289..16 1370 100 Minus
3R 32079331 3R 18191327..18191459 421..289 665 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:32:05 has no hits.

BO24771.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:59 Download gff for BO24771.complete
Subject Subject Range Query Range Percent Splice Strand
CG14313-RA 1..405 17..423 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:40 Download gff for BO24771.complete
Subject Subject Range Query Range Percent Splice Strand
CG14313-RA 165..569 17..423 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:10 Download gff for BO24771.complete
Subject Subject Range Query Range Percent Splice Strand
CG14313-RA 165..569 17..423 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:10 Download gff for BO24771.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18191324..18191458 290..423 98 <- Minus
3R 18191531..18191803 17..289 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:40 Download gff for BO24771.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14017046..14017180 290..423 98 <- Minus
arm_3R 14017253..14017525 17..289 100   Minus

BO24771.pep Sequence

Translation from 16 to 439

> BO24771.pep
MGLMRTVGGASDAQLPEEAVSTLNHCPTYRQIPGAGTGAGSAPAKRVPVL
FSTNRGLYLRLAQPLADQMEVMTLQPSGQNYNISFCDLERWSTNRANVVS
LEDTFSIMQQRNMSPESMNYQPRLWKNNVSYSLMHASFLDH

BO24771.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14313-PA 135 CG14313-PA 1..135 1..135 708 100 Plus