BO24772.complete Sequence
718 bp assembled on 2010-05-17
GenBank Submission: KX796501
> BO24772.complete
GAAGTTATCAGTCGACATGATAGTGTTTCCGATTGTTTGTTCCAGAAGCA
ACACACATATGGACTGGCCCTGTAGTGGATTGTGTACCCAACACAGCCAA
ACAAACAGTGAGGCAATCACCCTTCGAAATGGGCCAAAAGCACACCAACA
CCAGTGCAGCAGTGCATGCACTCGATGGCTGTGTGTGCGTGTGAAAGTAG
TGAAAGCTGAAAGCCGAGGGCGAACGGGGCCAATACTTATGCTTATGCAA
GGCAGCCGAGATGCCGAGATGCCGACGCCACCGCCCCAAAGGGAGGCCAA
AAACGGAAAACAGGCGACATTCATCGCAGGACGTGAAGTGTTCACTGTAC
TTTGGGAGCGGAGGATAAGTCAAGACGTCAACAGAGGAAGCTGTACGATG
TTCGCCCCCCACTCGCTGCCCGTGACGTCACGACTGTTGCTTCTGGTGGT
GACACTGCTCTTCTGCCCCGTGCAGGCGCATCTCTCGAAGCGAAGCTACT
CGGATCAGAGTGTCCACGGCTACATGACCGAGCGCACCTGCTGGTGGAAC
GAGGTGTGTAAGGAGGAGTTCCAGAGCCTCTTCCGCTGCAAGTGCCCCCA
GTTCTCCTACTGCCGCTCGCCGGGACGCTACTACAATGCCTACTGCTCGA
TGACGGATACCGGTTATATTTGGACCCAGCCGAACTGGGATTGGGGGGCG
GCAAGCTTTCTAGACCAT
BO24772.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
St3-RC | 1581 | CG44167-PC | 939..1578 | 61..700 | 3200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
St3-RC | 2062 | CG44167-RC | 959..1598 | 61..700 | 3200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23686538..23686877 | 61..400 | 1700 | 100 | Plus |
2R | 25286936 | 2R | 23687032..23687164 | 400..532 | 665 | 100 | Plus |
2R | 25286936 | 2R | 23687431..23687516 | 615..700 | 430 | 100 | Plus |
2R | 25286936 | 2R | 23687232..23687316 | 531..615 | 425 | 100 | Plus |
2R | 25286936 | 2R | 23685850..23685894 | 17..61 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:32:11 has no hits.
BO24772.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:00 Download gff for
BO24772.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11293-RA | 1..456 | 245..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:43 Download gff for
BO24772.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
St3-RD | 172..855 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:12 Download gff for
BO24772.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
St3-RC | 959..1598 | 61..702 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:12 Download gff for
BO24772.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23685850..23685893 | 17..60 | 100 | -> | Plus |
2R | 23686538..23686877 | 61..400 | 100 | -> | Plus |
2R | 23687033..23687164 | 401..532 | 100 | -> | Plus |
2R | 23687234..23687316 | 533..615 | 100 | -> | Plus |
2R | 23687432..23687516 | 616..702 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:43 Download gff for
BO24772.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19573373..19573416 | 17..60 | 100 | -> | Plus |
arm_2R | 19574061..19574400 | 61..400 | 100 | -> | Plus |
arm_2R | 19574556..19574687 | 401..532 | 100 | -> | Plus |
arm_2R | 19574757..19574839 | 533..615 | 100 | -> | Plus |
arm_2R | 19574955..19575039 | 616..702 | 97 | | Plus |
BO24772.pep Sequence
Translation from 16 to 718
> BO24772.pep
MIVFPIVCSRSNTHMDWPCSGLCTQHSQTNSEAITLRNGPKAHQHQCSSA
CTRWLCVRVKVVKAESRGRTGPILMLMQGSRDAEMPTPPPQREAKNGKQA
TFIAGREVFTVLWERRISQDVNRGSCTMFAPHSLPVTSRLLLLVVTLLFC
PVQAHLSKRSYSDQSVHGYMTERTCWWNEVCKEEFQSLFRCKCPQFSYCR
SPGRYYNAYCSMTDTGYIWTQPNWDWGAASFLDH
BO24772.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
St3-PC | 526 | CG44167-PC | 314..526 | 16..228 | 1191 | 100 | Plus |