BO24774.complete Sequence
772 bp assembled on 2010-05-17
> BO24774.complete
GAAGTTATCAGTCGACATGGGAGAGCGTGTTGAAAAGCGACAGAGAAAAA
TGGGGGGATGTGGATTACAGCTCGTCATACCATTGGTCACAATCCTCATC
CTGGCTGCGCAGGCGCAGGCTGTGACGTCATCGCCCGTCCTGAAGGACGA
CACTTTGGGGGATGCTGCTCCGACGGCAGCGCATTCAGCAGCCAAAATCC
TTGAAGACGTCCAAACCATCAGCGCAGTTCAGGATTGGAGTTTGCTGTGT
AAAGAGCTCTGCGGAGCTGGCCTGGGCGTTGCTTCAACGCCTGATGTGGC
CAAAAACACAATCCTGAGACCGGAGACGGATGTGGCCAAGTGCCGGCAAC
TGTGTGGACTGCCTAGGGCTAAAGCGGGCGACTTGGTCTGCTCGAGCTTT
TGTGGTCAGATGGGTCGCTCCCTGCCCGGATGCAGTCCCTGCCAGCAGGA
GGTGCGCAGGATGAGGGTGATGAAGGAGCGGAAGCAGGAGGAGGAGAAGC
AGGAGGAGGTTCGAAAGGACGAGGAGAAGGCCAGTGGAGTGCTGGGCGAT
CCAACACACGGTTCCAGAGCCGCGGAGAATGCCGAACGGAGAGGATCGGT
CGAGGAAGCAACAGTGTCCGCAGCTACCGTGGCAGCCGCCTCGGAAACGG
ACACAACCACTCCGGCACCGGACTGGGACGAAGTGTGCAAGGTGCTCTGC
AAGACTGGCGATGGCGGGTCTTTGTGCAACTGTGATTTATCGCCGTTCTT
CAGCGCAAGCTTTCTAGACCAT
BO24774.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14989-RE | 741 | CG14989-PE | 1..738 | 17..754 | 3690 | 100 | Plus |
CG14989-RD | 741 | CG14989-PD | 1..738 | 17..754 | 3690 | 100 | Plus |
CG14989-RC | 741 | CG14989-PC | 1..738 | 17..754 | 3690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14989-RE | 2917 | CG14989-RE | 132..869 | 17..754 | 3690 | 100 | Plus |
CG14989-RD | 1508 | CG14989-RD | 127..864 | 17..754 | 3690 | 100 | Plus |
CG14989-RC | 1111 | CG14989-RC | 132..869 | 17..754 | 3690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4090272..4090658 | 368..754 | 1935 | 100 | Plus |
3L | 28110227 | 3L | 4088967..4089214 | 17..264 | 1240 | 100 | Plus |
3L | 28110227 | 3L | 4090034..4090146 | 260..372 | 535 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:32:23 has no hits.
BO24774.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:01 Download gff for
BO24774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14989-RB | 1..705 | 50..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:47 Download gff for
BO24774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14989-RC | 132..869 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:17 Download gff for
BO24774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14989-RC | 132..869 | 17..756 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:17 Download gff for
BO24774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4088967..4089214 | 17..264 | 100 | -> | Plus |
3L | 4090039..4090142 | 265..368 | 100 | -> | Plus |
3L | 4090273..4090658 | 369..756 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:47 Download gff for
BO24774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4090039..4090142 | 265..368 | 100 | -> | Plus |
arm_3L | 4088967..4089214 | 17..264 | 100 | -> | Plus |
arm_3L | 4090273..4090658 | 369..756 | 99 | | Plus |
BO24774.pep Sequence
Translation from 16 to 772
> BO24774.pep
MGERVEKRQRKMGGCGLQLVIPLVTILILAAQAQAVTSSPVLKDDTLGDA
APTAAHSAAKILEDVQTISAVQDWSLLCKELCGAGLGVASTPDVAKNTIL
RPETDVAKCRQLCGLPRAKAGDLVCSSFCGQMGRSLPGCSPCQQEVRRMR
VMKERKQEEEKQEEVRKDEEKASGVLGDPTHGSRAAENAERRGSVEEATV
SAATVAAASETDTTTPAPDWDEVCKVLCKTGDGGSLCNCDLSPFFSASFL
DH
BO24774.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14989-PE | 246 | CG14989-PE | 1..246 | 1..246 | 1272 | 100 | Plus |
CG14989-PD | 246 | CG14989-PD | 1..246 | 1..246 | 1272 | 100 | Plus |
CG14989-PC | 246 | CG14989-PC | 1..246 | 1..246 | 1272 | 100 | Plus |
CG14989-PF | 171 | CG14989-PF | 1..171 | 76..246 | 902 | 99.4 | Plus |