Clone BO24774 Report

Search the DGRC for BO24774

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:74
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO24774.pep: Imported from assembly
Sequenced Size:772

Clone Sequence Records

BO24774.complete Sequence

772 bp assembled on 2010-05-17

> BO24774.complete
GAAGTTATCAGTCGACATGGGAGAGCGTGTTGAAAAGCGACAGAGAAAAA
TGGGGGGATGTGGATTACAGCTCGTCATACCATTGGTCACAATCCTCATC
CTGGCTGCGCAGGCGCAGGCTGTGACGTCATCGCCCGTCCTGAAGGACGA
CACTTTGGGGGATGCTGCTCCGACGGCAGCGCATTCAGCAGCCAAAATCC
TTGAAGACGTCCAAACCATCAGCGCAGTTCAGGATTGGAGTTTGCTGTGT
AAAGAGCTCTGCGGAGCTGGCCTGGGCGTTGCTTCAACGCCTGATGTGGC
CAAAAACACAATCCTGAGACCGGAGACGGATGTGGCCAAGTGCCGGCAAC
TGTGTGGACTGCCTAGGGCTAAAGCGGGCGACTTGGTCTGCTCGAGCTTT
TGTGGTCAGATGGGTCGCTCCCTGCCCGGATGCAGTCCCTGCCAGCAGGA
GGTGCGCAGGATGAGGGTGATGAAGGAGCGGAAGCAGGAGGAGGAGAAGC
AGGAGGAGGTTCGAAAGGACGAGGAGAAGGCCAGTGGAGTGCTGGGCGAT
CCAACACACGGTTCCAGAGCCGCGGAGAATGCCGAACGGAGAGGATCGGT
CGAGGAAGCAACAGTGTCCGCAGCTACCGTGGCAGCCGCCTCGGAAACGG
ACACAACCACTCCGGCACCGGACTGGGACGAAGTGTGCAAGGTGCTCTGC
AAGACTGGCGATGGCGGGTCTTTGTGCAACTGTGATTTATCGCCGTTCTT
CAGCGCAAGCTTTCTAGACCAT

BO24774.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-RE 741 CG14989-PE 1..738 17..754 3690 100 Plus
CG14989-RD 741 CG14989-PD 1..738 17..754 3690 100 Plus
CG14989-RC 741 CG14989-PC 1..738 17..754 3690 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-RE 2917 CG14989-RE 132..869 17..754 3690 100 Plus
CG14989-RD 1508 CG14989-RD 127..864 17..754 3690 100 Plus
CG14989-RC 1111 CG14989-RC 132..869 17..754 3690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4090272..4090658 368..754 1935 100 Plus
3L 28110227 3L 4088967..4089214 17..264 1240 100 Plus
3L 28110227 3L 4090034..4090146 260..372 535 98.2 Plus
Blast to na_te.dros performed on 2014-11-28 02:32:23 has no hits.

BO24774.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:01 Download gff for BO24774.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..705 50..756 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:47 Download gff for BO24774.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 132..869 17..756 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:17 Download gff for BO24774.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 132..869 17..756 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:17 Download gff for BO24774.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4088967..4089214 17..264 100 -> Plus
3L 4090039..4090142 265..368 100 -> Plus
3L 4090273..4090658 369..756 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:47 Download gff for BO24774.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4090039..4090142 265..368 100 -> Plus
arm_3L 4088967..4089214 17..264 100 -> Plus
arm_3L 4090273..4090658 369..756 99   Plus

BO24774.pep Sequence

Translation from 16 to 772

> BO24774.pep
MGERVEKRQRKMGGCGLQLVIPLVTILILAAQAQAVTSSPVLKDDTLGDA
APTAAHSAAKILEDVQTISAVQDWSLLCKELCGAGLGVASTPDVAKNTIL
RPETDVAKCRQLCGLPRAKAGDLVCSSFCGQMGRSLPGCSPCQQEVRRMR
VMKERKQEEEKQEEVRKDEEKASGVLGDPTHGSRAAENAERRGSVEEATV
SAATVAAASETDTTTPAPDWDEVCKVLCKTGDGGSLCNCDLSPFFSASFL
DH

BO24774.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-PE 246 CG14989-PE 1..246 1..246 1272 100 Plus
CG14989-PD 246 CG14989-PD 1..246 1..246 1272 100 Plus
CG14989-PC 246 CG14989-PC 1..246 1..246 1272 100 Plus
CG14989-PF 171 CG14989-PF 1..171 76..246 902 99.4 Plus