Clone BO24796 Report

Search the DGRC for BO24796

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG17454-RA
Protein status:BO24796.pep: Imported from assembly
Sequenced Size:763

Clone Sequence Records

BO24796.complete Sequence

763 bp assembled on 2010-05-17

GenBank Submission: KX797466

> BO24796.complete
GAAGTTATCAGTCGACATGGCGGACGACTTGCATAATTATAAGCTACAAT
TGCAACAAGTGGAGGCAGCTCTTCAAACTGATCCAGAAAATGAAGAGCTA
TTAAAACTCAGAAGTGATCTTGACGAAGTTATTACCCTTACTCGTGATTT
GATACAAACTCAACTGGAAGAACAAAATAAATCTTCATATGTGGAGCCAT
CATCAACCAAAAGAGATTCGTCCAACTACTTCGACGAAATAGAAGCAGCT
CTATTAGAAGCAGAAAAATTAGTTTCAGCTGCTAAGATTTGGAAAAAAGG
AGACAAGTGTCAAGCTAAATGGAAGGAGGATCGTCAGTACTACGATGCAA
CTATTGAAGATATATCAAGTACAGGAGAAGTTAATGTAATATTCGATGCC
TATCAAAATCGATCTACGACCCACGTCAATGAGTTGCGTGAACGTACTAT
TCGCAACGAAGTTTTTCCGTCAAACAAGCGGCACAGGCCCAATCAAAAAG
AATATTTAAAAAAACGTAAGCAAAAAAAGCAACAGCGCTTCAAGGACTTG
GAAGAGGAACGTGAATCAGACAAGAACAAATGGCTTAATTTTAACAACAA
AAACCAAAAAAAAAACGGAATGAAAGCAAGAAGTATATTTGCGTCTCCGG
ATAATGTAAGCGGCAGAGTAGGAGTCGGCACTTGTGGAACTGCAGGAAAG
GGCATGACAGATTTTACTGTGGGTGAAAAATATAGAAAAGGTCTTGCAAG
CTTTCTAGACCAT

BO24796.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:30:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG17454-RA 732 CG17454-PA 1..729 17..745 3645 100 Plus
CG17454-RB 693 CG17454-PB 4..690 59..745 3435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG17454-RA 880 CG17454-RA 103..831 17..745 3645 100 Plus
CG17454-RB 1163 CG17454-RB 428..1114 59..745 3435 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:30:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 23715902..23716321 59..478 2100 100 Plus
3L 28110227 3L 23716369..23716640 474..745 1345 99.6 Plus
3L 28110227 3L 23715125..23715169 17..61 225 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:30:52 has no hits.

BO24796.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:53 Download gff for BO24796.complete
Subject Subject Range Query Range Percent Splice Strand
CG17454-RA 101..829 17..747 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:14 Download gff for BO24796.complete
Subject Subject Range Query Range Percent Splice Strand
CG17454-RA 103..831 17..747 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:50 Download gff for BO24796.complete
Subject Subject Range Query Range Percent Splice Strand
CG17454-RA 103..831 17..747 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:50 Download gff for BO24796.complete
Subject Subject Range Query Range Percent Splice Strand
3L 23715125..23715166 17..58 100 -> Plus
3L 23715902..23716320 59..477 100 -> Plus
3L 23716373..23716640 478..747 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:14 Download gff for BO24796.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 23708225..23708266 17..58 100 -> Plus
arm_3L 23709002..23709420 59..477 100 -> Plus
arm_3L 23709473..23709740 478..747 99   Plus

BO24796.pep Sequence

Translation from 16 to 763

> BO24796.pep
MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQL
EEQNKSSYVEPSSTKRDSSNYFDEIEAALLEAEKLVSAAKIWKKGDKCQA
KWKEDRQYYDATIEDISSTGEVNVIFDAYQNRSTTHVNELRERTIRNEVF
PSNKRHRPNQKEYLKKRKQKKQQRFKDLEEERESDKNKWLNFNNKNQKKN
GMKARSIFASPDNVSGRVGVGTCGTAGKGMTDFTVGEKYRKGLASFLDH

BO24796.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG17454-PA 243 CG17454-PA 1..243 1..243 1258 100 Plus
CG17454-PB 230 CG17454-PB 2..230 15..243 1184 100 Plus