BO24796.complete Sequence
763 bp assembled on 2010-05-17
GenBank Submission: KX797466
> BO24796.complete
GAAGTTATCAGTCGACATGGCGGACGACTTGCATAATTATAAGCTACAAT
TGCAACAAGTGGAGGCAGCTCTTCAAACTGATCCAGAAAATGAAGAGCTA
TTAAAACTCAGAAGTGATCTTGACGAAGTTATTACCCTTACTCGTGATTT
GATACAAACTCAACTGGAAGAACAAAATAAATCTTCATATGTGGAGCCAT
CATCAACCAAAAGAGATTCGTCCAACTACTTCGACGAAATAGAAGCAGCT
CTATTAGAAGCAGAAAAATTAGTTTCAGCTGCTAAGATTTGGAAAAAAGG
AGACAAGTGTCAAGCTAAATGGAAGGAGGATCGTCAGTACTACGATGCAA
CTATTGAAGATATATCAAGTACAGGAGAAGTTAATGTAATATTCGATGCC
TATCAAAATCGATCTACGACCCACGTCAATGAGTTGCGTGAACGTACTAT
TCGCAACGAAGTTTTTCCGTCAAACAAGCGGCACAGGCCCAATCAAAAAG
AATATTTAAAAAAACGTAAGCAAAAAAAGCAACAGCGCTTCAAGGACTTG
GAAGAGGAACGTGAATCAGACAAGAACAAATGGCTTAATTTTAACAACAA
AAACCAAAAAAAAAACGGAATGAAAGCAAGAAGTATATTTGCGTCTCCGG
ATAATGTAAGCGGCAGAGTAGGAGTCGGCACTTGTGGAACTGCAGGAAAG
GGCATGACAGATTTTACTGTGGGTGAAAAATATAGAAAAGGTCTTGCAAG
CTTTCTAGACCAT
BO24796.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:30:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17454-RA | 732 | CG17454-PA | 1..729 | 17..745 | 3645 | 100 | Plus |
CG17454-RB | 693 | CG17454-PB | 4..690 | 59..745 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:30:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17454-RA | 880 | CG17454-RA | 103..831 | 17..745 | 3645 | 100 | Plus |
CG17454-RB | 1163 | CG17454-RB | 428..1114 | 59..745 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:30:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 23715902..23716321 | 59..478 | 2100 | 100 | Plus |
3L | 28110227 | 3L | 23716369..23716640 | 474..745 | 1345 | 99.6 | Plus |
3L | 28110227 | 3L | 23715125..23715169 | 17..61 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:30:52 has no hits.
BO24796.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:53 Download gff for
BO24796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17454-RA | 101..829 | 17..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:14 Download gff for
BO24796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17454-RA | 103..831 | 17..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:50 Download gff for
BO24796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17454-RA | 103..831 | 17..747 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:50 Download gff for
BO24796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 23715125..23715166 | 17..58 | 100 | -> | Plus |
3L | 23715902..23716320 | 59..477 | 100 | -> | Plus |
3L | 23716373..23716640 | 478..747 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:14 Download gff for
BO24796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 23708225..23708266 | 17..58 | 100 | -> | Plus |
arm_3L | 23709002..23709420 | 59..477 | 100 | -> | Plus |
arm_3L | 23709473..23709740 | 478..747 | 99 | | Plus |
BO24796.pep Sequence
Translation from 16 to 763
> BO24796.pep
MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQL
EEQNKSSYVEPSSTKRDSSNYFDEIEAALLEAEKLVSAAKIWKKGDKCQA
KWKEDRQYYDATIEDISSTGEVNVIFDAYQNRSTTHVNELRERTIRNEVF
PSNKRHRPNQKEYLKKRKQKKQQRFKDLEEERESDKNKWLNFNNKNQKKN
GMKARSIFASPDNVSGRVGVGTCGTAGKGMTDFTVGEKYRKGLASFLDH
BO24796.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17454-PA | 243 | CG17454-PA | 1..243 | 1..243 | 1258 | 100 | Plus |
CG17454-PB | 230 | CG17454-PB | 2..230 | 15..243 | 1184 | 100 | Plus |