Clone BO24815 Report

Search the DGRC for BO24815

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:248
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG13028-RA
Protein status:BO24815.pep: Imported from assembly
Sequenced Size:589

Clone Sequence Records

BO24815.complete Sequence

589 bp assembled on 2010-05-17

GenBank Submission: KX794736

> BO24815.complete
GAAGTTATCAGTCGACATGCAGTTCATCTATTTGACGCTGGCATTGGGGC
TGATCTTCACCACTGCCCTTCAGGCGGCCATTATACCACTGACCCTGATC
AAAAACGGAATTGAAGCGAATTCCCAAGCACTTCCCACGGATACGGAGAA
GTTCGGTTACCTGGAATTCAAACCCAATGGATCACTAATACTCAGAAGGG
CGCCCAATCAGAGTGGCAGTAACCTACAGGACCTGGTAATGCTGAGAGGA
GTTCTTCAGGCTCTGAAAGCGAGTCCCTCGAAAATGTCGGACATCGGTGG
CGAAACGCGATTGAGCCTAAGGATTTATGGAGATGGAGTGGAACACAAGT
TTCCGCCCATACTGGAGAATATCATTCAACGCATTCAAACGTATTTTTCG
GTTTATCGCTTTACGGATACAAGCAAACCCGGTGGATTGCAGCGAATTGA
ACTTACTACACAGCCGCCGGATGATTCTCCGGATGTAACCACTGCAAAAG
CCGAGAACGATGATGAACTGATAGCAGTCGGTGAGCAGGACGCGTACATT
ACAGTGGGGGATGATACAGACGCAAGCTTTCTAGACCAT

BO24815.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-RA 558 CG13028-PA 1..555 17..571 2775 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-RA 743 CG13028-RA 76..634 13..571 2780 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16923327..16923885 13..571 2780 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 02:35:03 has no hits.

BO24815.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:15 Download gff for BO24815.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..555 17..573 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:50 Download gff for BO24815.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 80..634 17..573 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:09 Download gff for BO24815.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 80..634 17..573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:09 Download gff for BO24815.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16923331..16923885 17..573 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:50 Download gff for BO24815.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16916431..16916985 17..573 99   Plus

BO24815.pep Sequence

Translation from 16 to 589

> BO24815.pep
MQFIYLTLALGLIFTTALQAAIIPLTLIKNGIEANSQALPTDTEKFGYLE
FKPNGSLILRRAPNQSGSNLQDLVMLRGVLQALKASPSKMSDIGGETRLS
LRIYGDGVEHKFPPILENIIQRIQTYFSVYRFTDTSKPGGLQRIELTTQP
PDDSPDVTTAKAENDDELIAVGEQDAYITVGDDTDASFLDH

BO24815.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:42:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-PA 185 CG13028-PA 1..185 1..185 935 100 Plus