Clone BO24817 Report

Search the DGRC for BO24817

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:248
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG14488-RA
Protein status:BO24817.pep: Imported from assembly
Sequenced Size:436

Clone Sequence Records

BO24817.complete Sequence

436 bp assembled on 2010-05-17

GenBank Submission: KX796508

> BO24817.complete
GAAGTTATCAGTCGACATGGTTGATCGTGGAAATAATTTGGTACTCCCAG
TGGGCCCATGTTCAACGGAACTAACGGAATCTCAAGCGAGTTTTGCTCCA
CCCAAAATTAAGAAAGTGCTCCCCACTAGAGCAAATCGCATGGAACAGTT
TCTATGGCAGGAACTCTTTGCCGAATACAACCGACAGGCCTCCGCCCAAG
TGGATTTGGGTGAGGATCGCACGGAGTACTACGACCAGTTCTGCAAGGAT
GTGCCACCGAAAAACGAAGAGACCGAGGAAGTTCTGGTCAACAAGTATCC
ACTTTACTGCACTACTGCCGTAACAGTATGGAATCACGAGGGAGATTTCA
CCAAGACTTTCAAAAGAAAATATTCTATTACCAGACCTATAGATCTGTGT
CCTGATAAGTTTGCACTTGCAAGCTTTCTAGACCAT

BO24817.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14488-RA 405 CG14488-PA 1..402 17..418 2010 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14488-RA 569 CG14488-RA 63..464 17..418 2010 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17767270..17767565 418..123 1480 100 Minus
2R 25286936 2R 17767619..17767724 122..17 530 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:35:15 has no hits.

BO24817.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:16 Download gff for BO24817.complete
Subject Subject Range Query Range Percent Splice Strand
CG14488-RA 35..436 17..420 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:54 Download gff for BO24817.complete
Subject Subject Range Query Range Percent Splice Strand
CG14488-RA 63..464 17..420 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:12 Download gff for BO24817.complete
Subject Subject Range Query Range Percent Splice Strand
CG14488-RA 63..464 17..420 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:12 Download gff for BO24817.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17767268..17767565 123..420 99 <- Minus
2R 17767619..17767724 17..122 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:54 Download gff for BO24817.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13654773..13655070 123..420 99 <- Minus
arm_2R 13655124..13655229 17..122 100   Minus

BO24817.pep Sequence

Translation from 16 to 436

> BO24817.pep
MVDRGNNLVLPVGPCSTELTESQASFAPPKIKKVLPTRANRMEQFLWQEL
FAEYNRQASAQVDLGEDRTEYYDQFCKDVPPKNEETEEVLVNKYPLYCTT
AVTVWNHEGDFTKTFKRKYSITRPIDLCPDKFALASFLDH

BO24817.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14488-PA 134 CG14488-PA 1..134 1..134 722 100 Plus