Clone BO24823 Report

Search the DGRC for BO24823

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:248
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG14870-RA
Protein status:BO24823.pep: Imported from assembly
Sequenced Size:757

Clone Sequence Records

BO24823.complete Sequence

757 bp assembled on 2010-05-17

GenBank Submission: KX796012

> BO24823.complete
GAAGTTATCAGTCGACATGAGCGCCAGCGAAGGCATCAGTCTCCCGGGCA
ACGAGGAAACCACTCCGCCGCATGAAAAACATAAACAAAAGGCCAAGAAG
GCCAAAAAGAAGTCCCGGAGTGCCAAAGAAAGTGTTCCCAATGCAATGGA
CGCGAAAGCCACTGCCAGCTACTTTAGTTTGAGCATCGTGGGCCAAATAG
TCTCGGCCACCTTTCCCCTGGGTCCCGACAAGGAGTTCGTCTTCCTGCGC
TACGAAATGGTCGCTGGTCCCGACTGGCAGCTGTCCTCCGGACCCCAGCA
CGGACTCACCCAGCTGGCCACCAATAGAAGGGGCCATTTCAACGAACCGA
TTGTCTTCAATATGCCCATCGAGGTGACCTACAAGAGCACCAGTCCATAT
GGCTGGCCACAGATCCTGGTGACCGTGTTCGGACGCAGTGGCCTGGGCAG
GGAGACACTACTCGGTTACGCTCACATCCACCTGCCCGTTTTCGGCAGTC
GTCGTCCAGCGGATCAGACGGAGCAGCTGCAGGCGCCCATCCTGATGCCC
AAGTGCCCCAACATGATGGCGGACATCACCAGTTGGCTGCTGCGCCGCGA
GCCGGAGCTGAAGGACCCCAAAGTGCTGCTGGACAACCTGAAGTGCAAGG
GACTCTCTATGGAGTCGTACGGCAGCCTACAGTTTCAGCTGTCCTCCGTG
ATGAGGGGCGCCCGCAAGCTGGGCTACCATTGGCACTCCGCAAGCTTTCT
AGACCAT

BO24823.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:32:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14870-RA 726 CG14870-PA 1..723 17..739 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14870-RA 881 CG14870-RA 101..824 16..739 3620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15482006..15482395 16..405 1950 100 Plus
3R 32079331 3R 15482513..15482847 405..739 1675 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:32:50 has no hits.

BO24823.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:03 Download gff for BO24823.complete
Subject Subject Range Query Range Percent Splice Strand
CG14870-RA 102..824 17..741 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:57 Download gff for BO24823.complete
Subject Subject Range Query Range Percent Splice Strand
CG14870-RA 102..824 17..741 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:24 Download gff for BO24823.complete
Subject Subject Range Query Range Percent Splice Strand
CG14870-RA 102..824 17..741 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:24 Download gff for BO24823.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15482007..15482394 17..404 100 -> Plus
3R 15482513..15482847 405..741 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:57 Download gff for BO24823.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11307729..11308116 17..404 100 -> Plus
arm_3R 11308235..11308569 405..741 99   Plus

BO24823.pep Sequence

Translation from 16 to 757

> BO24823.pep
MSASEGISLPGNEETTPPHEKHKQKAKKAKKKSRSAKESVPNAMDAKATA
SYFSLSIVGQIVSATFPLGPDKEFVFLRYEMVAGPDWQLSSGPQHGLTQL
ATNRRGHFNEPIVFNMPIEVTYKSTSPYGWPQILVTVFGRSGLGRETLLG
YAHIHLPVFGSRRPADQTEQLQAPILMPKCPNMMADITSWLLRREPELKD
PKVLLDNLKCKGLSMESYGSLQFQLSSVMRGARKLGYHWHSASFLDH

BO24823.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14870-PA 241 CG14870-PA 1..241 1..241 1270 100 Plus