BO24836.complete Sequence
385 bp assembled on 2010-05-17
GenBank Submission: KX796900
> BO24836.complete
GAAGTTATCAGTCGACATGAAATATCCCACAATTATTTTATTTGCGCTAG
CCGCATTCATTTTGCCAACATTTGCCGCAAATGACTACCTGTGGGGTGAA
GTTGGTGCAGATGATTACCAATTGGCAAAGGATACGGTTTCGAAGGCGTT
TTTCGTTGGTCTAGTGCAGACGAAAAAATACGTATTCAAGCAGTCGGACA
ACCTAAATGCGTTGACCATTACGGCAATTAAGATTACCGACAAAAAGAAG
AGTCACGGAGCAACTGCTGTATTGGTCAGTGGAGGTCCTGGATCCAAAGG
AGCAACTATTAAGTTCACTTCCGAACGAGGTTACGGCATCAAGGATATCG
TGGAAATATGGGGTCGTGCAAGCTTTCTAGACCAT
BO24836.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34026-RB | 354 | CG34026-PB | 1..351 | 17..367 | 1755 | 100 | Plus |
CG34026-RA | 354 | CG34026-PA | 1..351 | 17..367 | 1755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34026-RB | 747 | CG34026-RB | 27..377 | 17..367 | 1755 | 100 | Plus |
CG34026-RA | 427 | CG34026-RA | 27..377 | 17..367 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9533844..9534024 | 17..197 | 905 | 100 | Plus |
X | 23542271 | X | 9534084..9534255 | 196..367 | 860 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:36:08 has no hits.
BO24836.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:20 Download gff for
BO24836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34026-RA | 1..351 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:11 Download gff for
BO24836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34026-RA | 27..377 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:26 Download gff for
BO24836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34026-RA | 27..377 | 17..369 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:26 Download gff for
BO24836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9533844..9534023 | 17..196 | 100 | -> | Plus |
X | 9534085..9534255 | 197..369 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:11 Download gff for
BO24836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9427877..9428056 | 17..196 | 100 | -> | Plus |
arm_X | 9428118..9428288 | 197..369 | 98 | | Plus |
BO24836.pep Sequence
Translation from 16 to 385
> BO24836.pep
MKYPTIILFALAAFILPTFAANDYLWGEVGADDYQLAKDTVSKAFFVGLV
QTKKYVFKQSDNLNALTITAIKITDKKKSHGATAVLVSGGPGSKGATIKF
TSERGYGIKDIVEIWGRASFLDH
BO24836.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:44:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34026-PB | 117 | CG34026-PB | 1..117 | 1..117 | 598 | 100 | Plus |
CG34026-PA | 117 | CG34026-PA | 1..117 | 1..117 | 598 | 100 | Plus |
CG30413-PA | 122 | CG30413-PA | 28..120 | 22..116 | 192 | 48.4 | Plus |