BO24860.complete Sequence
703 bp assembled on 2010-05-17
GenBank Submission: KX793970
> BO24860.complete
GAAGTTATCAGTCGACATGGGACCAAGGCTCTATCCCGCTGCGATCCTCA
TCCTCCATTGCCTGCTGTTGCTCTTCCTCCAGGTGGACAGCAGAGGTAAC
CAGAACCACACCCAGATGGAAAGACAGCGTCATCTCCGAGCACACAATCT
GCACAGGCCTCCATACGATGGATACGATTGGCACAAACACTTTAACCGAG
ATGCCGAACCAAAGGCGACAGTTGCAAAGGAGAAAGAAGAGAAGACTTTC
AAACACAGATCAGGACATTTAAAAAAGATGAAGCAGACAGCTAGGGATAT
TTCGAACTGGAGCAGAGCTCGGAGCGCCTACCAAAAAGAGACGGCAGAGC
TGGAGGAATGGGGTCGAAAGAAGAATATAACTGACAACGAACTGAAGTTA
TTCTTTGACGGTGAAATTTCTACCAAAGACAAGTACAGATTATTTGGGGA
CATTCAAACGGTTGTCCAGATCCTGAAAGAGGTGATAAAAAAGGGAGCTG
TGACCGAAAAAGAGAAAGCAATGATAACGCCGGAACTGAAACCATTGATC
TTAAGATTCGGCCGCATGTTTGAAAGGGAATTTGCCAAGAACACAAATGC
CTTGGAAGCCTTGCAGATCCTTGTTCATGAGGTTCAAAAATCGAACAGCC
GGAACATGAGACATAAGAGTGCTAAAAGGTCTCACGCAAGCTTTCTAGAC
CAT
BO24860.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:30:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34051-RA | 672 | CG34051-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
CG34051-RB | 669 | CG34051-PB | 1..666 | 17..685 | 3265 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:30:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34051-RA | 771 | CG34051-RA | 4..673 | 16..685 | 3350 | 100 | Plus |
CG34051-RB | 768 | CG34051-RB | 4..670 | 16..685 | 3270 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19960404..19960595 | 502..311 | 960 | 100 | Minus |
2L | 23513712 | 2L | 19960167..19960350 | 685..502 | 920 | 100 | Minus |
2L | 23513712 | 2L | 19960854..19961027 | 189..16 | 870 | 100 | Minus |
2L | 23513712 | 2L | 19960659..19960781 | 312..190 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:30:28 has no hits.
BO24860.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:57:50 Download gff for
BO24860.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34051-RA | 1..669 | 17..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:06 Download gff for
BO24860.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34051-RA | 5..673 | 17..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:42 Download gff for
BO24860.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34051-RA | 5..673 | 17..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:42 Download gff for
BO24860.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19960165..19960350 | 502..687 | 98 | <- | Minus |
2L | 19960405..19960593 | 313..501 | 100 | <- | Minus |
2L | 19960659..19960781 | 190..312 | 100 | <- | Minus |
2L | 19960854..19961026 | 17..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:06 Download gff for
BO24860.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19960165..19960350 | 502..687 | 98 | <- | Minus |
arm_2L | 19960405..19960593 | 313..501 | 100 | <- | Minus |
arm_2L | 19960659..19960781 | 190..312 | 100 | <- | Minus |
arm_2L | 19960854..19961026 | 17..189 | 100 | | Minus |
BO24860.pep Sequence
Translation from 16 to 703
> BO24860.pep
MGPRLYPAAILILHCLLLLFLQVDSRGNQNHTQMERQRHLRAHNLHRPPY
DGYDWHKHFNRDAEPKATVAKEKEEKTFKHRSGHLKKMKQTARDISNWSR
ARSAYQKETAELEEWGRKKNITDNELKLFFDGEISTKDKYRLFGDIQTVV
QILKEVIKKGAVTEKEKAMITPELKPLILRFGRMFEREFAKNTNALEALQ
ILVHEVQKSNSRNMRHKSAKRSHASFLDH
BO24860.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34051-PA | 223 | CG34051-PA | 1..223 | 1..223 | 1168 | 100 | Plus |
CG34051-PB | 222 | CG34051-PB | 1..222 | 1..223 | 1152 | 99.6 | Plus |