BO24903.complete Sequence
1297 bp assembled on 2010-06-03
GenBank Submission: KX800088
> BO24903.complete
GAAGTTATCAGTCGACATGAACAAGCGCAGCGTCATCATCGCGGGAATCG
TGGCCAGCCTGTTGGGCTTGGCGCTCGGTGCCAACTTCTACTTTATGTAC
TACCTCAGCGCCGAGGAGGGTCATCTGGCCAGCGTCCGGGCGCTGGAGAA
CATGATACGGCACAAGATGCGCCACCTAAAACCCAACTACCTCAATCGCA
ATCCCCGCTTCTTCATGTTCCGCAACAAGCTGCTTAAGAACTACAAGGCG
GCGCCGTACGAGAACGCCAGTGTCCTCTGGGACATTGCGAACTGGTGGCC
GCACGAAAACGAGGTCTATCCCTTATACGACTCATCGATGGGACAGCTTT
TAGAAACACTGCGCCGCGAACCTATCACCCGGGTGAGCAACCTGGGTCGG
GGCACGCAACTGAAGCTCCTCGTCCGCCTTTCCCACCAGCAGAAGGTGAT
CTTTAAGCCGCAATGGTATCCGCGGGAAGAGGTCATCGATGGCATGATAT
ACAGTGGCAAGGATCGCCACACGGCGGAAGTATATGCCTTCTATCTGGGC
GCCGTGCTCGACTTTCGATGGACGCCCATAGTGGTGGGTCGAGTGGTGAA
CCTGAAGAAGGAGATATATGCCAAAGGCGATCCGGAACTCCAGCAAACCA
TAAACATCGAAACGGACGAGGATGGCAGGGAGAAGTACTGCCTGTTCGGG
AAGTGTCACTACTGCAACGAGGAGGAGACTGTTTGTGGCGATGAGCGGCA
CAACATTGAAGGTGTGCTCATATATATTGTTCCGGGTACGTTGGCTAAGC
GGCGATCACCGTGGCAACGCACCTACAAGGATGACAAGCGGGCGCCCTGG
GAGGACGATATGACCTATTGCAAATCGTTGAAAAATAAAATGGAGACCAT
CCGCCTGCTGGACCTTATAGATGCGTCTATTTTCGACTACCTAATCCAAA
ATGGAGATCGGCATCACTACGAGACGCGGGAAGAGCGCGTGGTGCTTATA
GACAATGGAAAAGCCTTCGGAAACCCGAACAAGGATCACTTGGACATATT
GGCGCCACTCTACCAATGCTGCCTTCTGCGAAAGTCCACGTGGGATCGCC
TGCAAGTCTTTTCCGGCGGCGTACTCACGGAAATCATCGATCGACTATCC
AAGCAGGATGCTCTCTATCCCCTGATTACGGATAAGCATAAAAAAGGAGT
GGAGCGACGACTTCTGGTGGTCTATGCTGTTGTGGAGCACTGCATGGACA
TCGAGGGCGACAAAATGTTCAAAACTCTGGCAAGCTTTCTAGACCAT
BO24903.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:52:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3631-RE | 1266 | CG3631-PE | 1..1263 | 17..1279 | 6315 | 100 | Plus |
| CG3631-RD | 1266 | CG3631-PD | 1..1263 | 17..1279 | 6315 | 100 | Plus |
| CG3631-RC | 1266 | CG3631-PC | 1..1263 | 17..1279 | 6315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:52:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3631-RE | 2710 | CG3631-RE | 874..2136 | 17..1279 | 6315 | 100 | Plus |
| CG3631-RD | 2705 | CG3631-RD | 869..2131 | 17..1279 | 6315 | 100 | Plus |
| CG3631-RC | 2776 | CG3631-RC | 940..2202 | 17..1279 | 6315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:52:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14880957..14881535 | 295..873 | 2895 | 100 | Plus |
| 3R | 32079331 | 3R | 14880516..14880794 | 17..295 | 1395 | 100 | Plus |
| 3R | 32079331 | 3R | 14881853..14882057 | 1075..1279 | 1025 | 100 | Plus |
| 3R | 32079331 | 3R | 14881596..14881796 | 874..1074 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:52:40 has no hits.
BO24903.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 14:00:05 Download gff for
BO24903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3631-RD | 885..2147 | 17..1281 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:34 Download gff for
BO24903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3631-RC | 926..2188 | 17..1281 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:29 Download gff for
BO24903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3631-RC | 940..2202 | 17..1281 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:29 Download gff for
BO24903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14880516..14880794 | 17..295 | 100 | -> | Plus |
| 3R | 14880958..14881535 | 296..873 | 100 | -> | Plus |
| 3R | 14881596..14881796 | 874..1074 | 100 | -> | Plus |
| 3R | 14881853..14882057 | 1075..1281 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:34 Download gff for
BO24903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10706238..10706516 | 17..295 | 100 | -> | Plus |
| arm_3R | 10706680..10707257 | 296..873 | 100 | -> | Plus |
| arm_3R | 10707318..10707518 | 874..1074 | 100 | -> | Plus |
| arm_3R | 10707575..10707779 | 1075..1281 | 99 | | Plus |
BO24903.pep Sequence
Translation from 16 to 1297
> BO24903.pep
MNKRSVIIAGIVASLLGLALGANFYFMYYLSAEEGHLASVRALENMIRHK
MRHLKPNYLNRNPRFFMFRNKLLKNYKAAPYENASVLWDIANWWPHENEV
YPLYDSSMGQLLETLRREPITRVSNLGRGTQLKLLVRLSHQQKVIFKPQW
YPREEVIDGMIYSGKDRHTAEVYAFYLGAVLDFRWTPIVVGRVVNLKKEI
YAKGDPELQQTINIETDEDGREKYCLFGKCHYCNEEETVCGDERHNIEGV
LIYIVPGTLAKRRSPWQRTYKDDKRAPWEDDMTYCKSLKNKMETIRLLDL
IDASIFDYLIQNGDRHHYETREERVVLIDNGKAFGNPNKDHLDILAPLYQ
CCLLRKSTWDRLQVFSGGVLTEIIDRLSKQDALYPLITDKHKKGVERRLL
VVYAVVEHCMDIEGDKMFKTLASFLDH
BO24903.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:41:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3631-PE | 421 | CG3631-PE | 1..421 | 1..421 | 2248 | 100 | Plus |
| CG3631-PD | 421 | CG3631-PD | 1..421 | 1..421 | 2248 | 100 | Plus |
| CG3631-PC | 421 | CG3631-PC | 1..421 | 1..421 | 2248 | 100 | Plus |
| CG31145-PF | 528 | CG31145-PF | 186..523 | 97..416 | 463 | 32.4 | Plus |
| CG31145-PB | 528 | CG31145-PB | 186..523 | 97..416 | 463 | 32.4 | Plus |
