BO24919.complete Sequence
2047 bp assembled on 2010-06-25
GenBank Submission: KX796548
> BO24919.complete
GAAGTTATCAGTCGACATGAACTCGCCGAGCGCCATTGCGGTGAAGGCCC
AGATCCTGGAGATGACGGGCGAGCACGTGGATCAGTTGCACGCGATGTGG
TCGCAGTTGTTCGAGGTCAAGACCTGCGGTGAGTTCCTCCTCCGGTTGAA
GGACCATGCGAACAGCTTCTTCACGGATTTGCTCAATGAGTCGCGCGAAA
AGCAGCAGGCGATCCTCAACGATATAGCCGCCTTGCGGGCAGAGGCCACC
GACTTGACGCGCCTACTCCACGAGCCGCTGGACATTGGCGAGCGGCCGGA
GTCCATGCCGCTGGTCGTCTGGGAGCTGAAGCTGGACAAAAGCATCGAGC
ACTTACGCGATCAGCTGGCCAGGCGGCGAGCGGAGATCTGTGAGCTTCTG
CTGCAGCAGGAGCAGCTGTGCGAGGAACTGGGAGAGCTGCCTCTGCCACT
GTTGGCGGATCCACTGCCGCTGCCCGAGGAGATGGACGCCTTTCGGAATC
GCCTGGGCCAGCTACGCGATCAGCGAGTGCTGCGCCTCAAAGAGATGGAC
CAGCTGCGCCAGGCCATTAAGCACGACATGAAGCTGCTTGAGTGCCTGCC
CCAGACGGACACCGAGGAGCGTCTGCTCAACCAGGTGGATCACTGCCTAA
CGCCGGAGACCTTCGAGCTCCTGCGCAACATGCAAAAGAACTTCGCCGAC
CAGGTGAAGGAGCTGAGGGAGCGCATCGACGATATGCGCGAAAAGATCCA
TGTGCTGTGGGACAGACTCCAGGAGACAGACGAGTATGCCATGCGTCGCG
TGCGCGAGGCTACGACCTACACTCAACGCACCTACGATGTCCTGCGGGAG
GAACTGCAGCGCTGCCAGGCCCTGCGACGCCAGAATCTGAAAACCTTCAT
CGAGCAGCTACGCATCGAGATCAAGGAGATGTGGGATCTCACACTTAAGA
GCCAGCAGGAGCGCAAGCGCTTCTCGAACTACTACAACGACTGGTACAAC
GAAGATCTGCTGGAGCTCCACGAACTTGAGCTGGACGACCTCAAGACCTT
CTACAACAAGAACAAGGAGATCTTCGATCTGTACGAAAGCCGTGCCGAAC
TCTGGTCGCGCATGGAGGCGCTGGAGGCCAAGGCGAGCGAGCCGAATCGC
TTCAACAATCGTGGCGGCCAGTTGCTCAAGGAGGAGAAGGAGCGCAAGGC
CATCACCTCCAAGCTGCCCAAGATTGAGCAGCAGATCACGGAACTGGTGC
AGGCATACGAGGCGCAGGAGAACACACCCTTTCTGGTGCACGGCGAGAAC
ATCCTGGAGCGGATGGCCGCCGATTGGGAGCGTCATCGCCAGGCCAAACA
GCAGAGCTCGGCGCGCAAGAAGGCACCGCCATCGGCCAGCAAGATAATGC
CACCGCCGGCAACGGGCTCGACAGCTCCACGCACGCCGCGCACGCTGCGC
AACATGTCGACCCTTTCCAGCTCCACCATGTCGCTGCGCAAGACGCCGTC
GCAGCAGCACCTCCGTCCACTAAACATCACCAAGAGTACGGGCAATCTGC
ACAAGCGCCTGAATCCGTCCGGCCTGCAGACGGGCCCCAAAACGCCCAAC
GCCAAGCGCAGCCTTATGAACACACTCAACTCGATGAAGGCGTCGCCAGC
CAAGCACCTGCTCGCGCCCAGCCAGCAGCATAACCAGCTGAAGAGCACCA
AGTCGCCGCTGAAACGTGTTCGCGTACTGGACAACACACTGCGACGCAGC
GGCGGTATGGGCAGGCGCAGCATTGGAACGCGTTCCAGCAAGAAGGCGCG
CACCAAGTCCAACGATCAGAACGCCCCACCCGACAGCAGTGACTACACAA
CGGACGAGAATCCCGAGCAGGGTGTCAGCTATGACGAATTTCAGCCGACC
AGTCGCTCCTCGATGCTGCCGCGCCAGCGTCATCAATTGGCCGTGCCGCG
AACTCGTCGTGCGGAAATGAATGCCAATCTGCCGGTGCCGCGGGAAAGCC
TGATGATCGTGCAGCCGCGCAGACAGTTCGCAAGCTTTCTAGACCAT
BO24919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| feo-RA | 2016 | CG11207-PA | 1..2013 | 17..2029 | 10065 | 100 | Plus |
| sofe-RB | 1824 | CG1655-PB | 38..1348 | 63..1373 | 1275 | 73.2 | Plus |
| sofe-RA | 1824 | CG1655-PA | 38..1348 | 63..1373 | 1275 | 73.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| feo-RA | 2424 | CG11207-RA | 266..2278 | 17..2029 | 10065 | 100 | Plus |
| sofe-RB | 2414 | CG1655-RB | 180..1490 | 63..1373 | 1275 | 73.2 | Plus |
| sofe-RA | 2272 | CG1655-RA | 180..1490 | 63..1373 | 1275 | 73.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:44:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10852592..10854604 | 2029..17 | 10065 | 100 | Minus |
| X | 23542271 | X | 10855924..10857234 | 1373..63 | 1275 | 73.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:44:34 has no hits.
BO24919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-25 11:27:52 Download gff for
BO24919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| feo-RA | 271..2283 | 17..2031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:23 Download gff for
BO24919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| feo-RA | 266..2278 | 17..2031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:24:03 Download gff for
BO24919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| feo-RA | 266..2278 | 17..2031 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:24:03 Download gff for
BO24919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10852590..10854604 | 17..2031 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:23 Download gff for
BO24919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10746623..10748637 | 17..2031 | 99 | | Minus |
BO24919.pep Sequence
Translation from 16 to 2047
> BO24919.pep
MNSPSAIAVKAQILEMTGEHVDQLHAMWSQLFEVKTCGEFLLRLKDHANS
FFTDLLNESREKQQAILNDIAALRAEATDLTRLLHEPLDIGERPESMPLV
VWELKLDKSIEHLRDQLARRRAEICELLLQQEQLCEELGELPLPLLADPL
PLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQTDTE
ERLLNQVDHCLTPETFELLRNMQKNFADQVKELRERIDDMREKIHVLWDR
LQETDEYAMRRVREATTYTQRTYDVLREELQRCQALRRQNLKTFIEQLRI
EIKEMWDLTLKSQQERKRFSNYYNDWYNEDLLELHELELDDLKTFYNKNK
EIFDLYESRAELWSRMEALEAKASEPNRFNNRGGQLLKEEKERKAITSKL
PKIEQQITELVQAYEAQENTPFLVHGENILERMAADWERHRQAKQQSSAR
KKAPPSASKIMPPPATGSTAPRTPRTLRNMSTLSSSTMSLRKTPSQQHLR
PLNITKSTGNLHKRLNPSGLQTGPKTPNAKRSLMNTLNSMKASPAKHLLA
PSQQHNQLKSTKSPLKRVRVLDNTLRRSGGMGRRSIGTRSSKKARTKSND
QNAPPDSSDYTTDENPEQGVSYDEFQPTSRSSMLPRQRHQLAVPRTRRAE
MNANLPVPRESLMIVQPRRQFASFLDH
BO24919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:01:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| feo-PA | 671 | CG11207-PA | 1..671 | 1..671 | 3450 | 100 | Plus |
| sofe-PB | 607 | CG1655-PB | 7..601 | 10..618 | 1698 | 57 | Plus |
| sofe-PA | 607 | CG1655-PA | 7..601 | 10..618 | 1698 | 57 | Plus |
