BO24926.complete Sequence
3622 bp assembled on 2010-08-11
> BO24926.complete
GAAGTTATCAGTCGACATGCCAGAAAGCCACAGTTACAAACTGAAACGTC
TAACGTCAACAACAAGACAGCAAACTAATACCAAAATGGTCCTAAGCAAT
TCCACGCCGAACAACCAGTCCAAGCACAACCAGATGGTAGTGGACACGGC
AGCCATGAACAGTGATGATCTCAGCGAGCTACTGCAGCTGAACGCGGAGA
TCGAGGAACGTCGTCGCTCCAGCCGCCACGGAGATGCCAGCACCGCCTGT
GGCCTGCTCCGAGCTACGATGACCAGGGAGGAACTCTTCGAGATTTCCTC
GCTGGATGATGATCGCTTCCTGACCGCCCTGGAGTACCAAAACTCGTTTG
CATCACCGCGCCGAGTGCAGGTTACCGACCTGGACTTGTCCAGCATCGAG
AATCTGATGAAGTACTTCGACGAAGAGGTACCTGTGACGCCAACAAAGAC
ACTGGGTACCACCAAGGCAGCGGGTAACACGGGTAAAGTGGCCAGCACAA
TTGCCAAGTTGGCCCTCCAGTCGGATCCGGTCACGCCGCCCAAGCCAAAA
GTGGGTAGTGGCCACCTAAAGATCAGCGAGCTCAAGCAGAAATACGAACA
GCTGCCGGAGATGGAGACGCCACGCTCTGCATATCAGGCTTCCAGAAAGG
TATCCGCGTCGCTGCCCATGAAGGTCAAGGAGATGGCCCAGCTGTTTAAC
TCCAAGATCAGCCAGGTGATGCGACGTACAGAGGAACCACAGTATGTTCA
GCTGCAAAATGAGATGTCGCCGGAGGTTAAGGCACAGAACCGCCTGGTGT
CGCCATTAGAGTCCCCAGTTCAAGGACCCTGCCTGGTGGCCGAGGAAGTT
TTCCGCGAGTTGAGCGTGAAGGACAAAGCCCTGCTGTTCAACAAGTTCAT
CGGTGACATGGCAGCCAAGCACCCCAAGTTCACTGCACATGCCGCAGATC
TCAAGGAGAAGGTAAACAAACAGGTGGCACGAGGGGAGGTGGTGGCTGAA
CGACAAGCCAGTGTTAAGCATCTCGCCCAGGAGTTGGAAGCGAAATGTAT
CCTGGAGCCGGGATCGCCACCGCGACCAGGTGGTGTCTCTCCCCCCAAGA
CGACTGAGAGCAAAACGGAGACATGCACCTCCCAGCTGCATGTGAGCACC
CTGACTGTGATCCTCAAGCCAAGTCCAGAGCGCAGAGCTCCACAGCCACG
ACCCCGCCGATGCCTGGATCGTCAGAGCGATGAACATGCCCGAGAGCCAT
CCCAGAAGCGAAACCTCGCCGCGATTCGCACCATGATGCCAACGGAGGCC
TATGCGCCACCAAAGAAAATCCGACGCACTCGACAGGAGCGCACCGGTGC
GGATAGCCAAATGTTTTTTCAGAACGAACACCTCGAAACCCTGTTCTACA
GCTGGCTCAGCTCGGAGAACGGTGTCCAGTTCGACATTACGAGTGTGTCT
GACGGTCAGCAGACCATTGAGATAGCCACCGAGGAGGGTAATCTTCTGGA
GCAACCGCTACTTGAGCCGAGCACCGCTACTCTGGAGGATGTGAGCCAAA
AGTCCGCCGTCGAGCGGCTTCTGGAGGAGGCCATCGCAAAATTAGAGCTA
GATAACGAGTCCAAGAAGGAGACACAAGTCGAGGAAAAGAAGGAGATGGA
TACAGCTCAGGATCCCATCGTTCAAGTCACTCCGCGACGCATTAAGCGCC
AGGCGCCGCCAGTGCCAGCCCCACGACCCAGTCTAAGTCAAGTTACCTCC
AGTGCATCCAGCTGCAAGCAATCCGAGGCTGAGGAAAGTGAATCCGGGTT
GTCTACACTCCCCAAGATAACCAGCGACGAATCCCAGCCAGAGACGCCCA
AGGATGACTTGCAGACAGGTGAATTTGATTTTGCCAAGCCCCAGCGTCCG
CCACGCAAGAAGAAAATGCGCCGAACTCTTACATGGAAAAAGGAGAACTC
CATTGTCGAGGCCACTGCAATAACCTCAACGGACTCCGATTCAGATTACA
AGCCTCCGCTATCAGGAGCGGCCAAGAAGAAGTCCGGTGCTATCTGTAAC
CCACTTCCAATGCCCGAGCCAAGTTTCATTGAGTTGGATAAGTCACTGAT
GCGCCACTTGAACTCGCCCCGGAAGATCAAGTCGGCATACACCCTCACCG
TGATGTCATCTCCCTCGCCGAATGCAGACAGCGATCAGTCTCCTAGTCAG
ACACCAAGGCAATCCCTGGTACAGGCCATGCGGGACAGTTTCGTGGATCA
GGGCTTTGAGACATGCTCGAACGATCCGATGGACAACAGTCCGATACGCC
GATCTTCGCTTGGAGCCACGGAATCGAAGCCATCCGGTTTTTCCACGCCA
GTTAAGGGACGCCATGCTTCCAGTCCGGCGCAACAACAACTGTTCAGTCC
GATTCTCATCCAGGAGCGCCCTCGTCGCAGTTCCCTGGCCATGCAAGTGA
TCCGGGAGGATCATCCGCTCGATCTGGACGCCACCTCCAGCTCACCCTCC
ACACCGTGCAGTGAGCGGGAGTTCTTCGCCAATGCCCCGACTGTTGAAAT
TGATAACTCCCAGGATGAGAGTCCGACCGGCAAGGCGCACTCAATGTTCT
GGATCACCTCTGGGGACTTCACAGTCTCCCTGGAAATCTTCAAGAACAGC
CCGGAGCGCCTGCGACTGCTGTACGAAATCTTCACCCAGAAAAGCTGGGA
GACTCGTGACCTGGCCTTCGGAATCGACGGACACAAGTTCATTCGCGGAG
CTCCCAGTTCCGACTCCGTCCGACAGTCGCTGCCCGAGCGTCCACCCAGT
GTGAAGGGCTGCTCTCACTATTGGTTCGCCAGCGGAGATCTCGCAGTGCC
CTTCAGCGGAAAACTGATGTCCAGCGAGAAGATCGAGCGGCTGTTTGCCT
TCCTCAGCGGAGAGCAGTCGGAGTTGCGCTTCGGCGTTGACCACATTGAG
TTCAGCAGCGTGCCTGAGTTCTGGCCCACCACCCAGAAGTATTCCATCGA
GAGCAGCTACAGCATACTGGTGGGTCTGCAGACAGGTGCCAGCAATGGCC
TGGAGGGTCGCAGCAAGTACTCCTGGCCCAACAGCAGCATCAGTGCCAAC
CAGGCGATCAAGACCAGCGACCTGGATCAGACGGAGTTCGAGTCCGATAG
CTTCGGCAACAACAGTGGTAGGCTGTCCTTTTCGCCTGATCTCTTCTCCC
TGGACTACGAGGCGGTTCCCCTGGACGAGCTGTTTGCCAAGGCTCCTCCC
TCTGCCGCCACACCCGCCATGTCCGTGCCGCAAATGATGCAGACCCTCAA
GCAGCAGCAGTCCAAACTTCGCAGTGTGGAGCAGCGCATTCGTGGCTACG
CCAAGCCCGCGAATCTGGCCGACTCTTCGCTGGAGCACTGCCGCAACACG
CCGCAATATGTCCACAAGCTGCGCTCCATCATCCGGGCCATTGACAACAT
TGGACGCGACGATGGCTTCCGCGGCTGCTCGATGGAGCAGCTCGAGAGCT
TCATGTACTTCCTCAGCGAGTATGCGGATGTGTGCCTGGCCAACTGCAGC
GAGCACATGGACAAGATTCTCGACACCCTGATGGACCGGAGGGCCGTGGA
GGTCGCAAGCTTTCTAGACCAT
BO24926.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:55:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| slam-RC | 3522 | CG9506-PC | 1..3519 | 86..3604 | 17595 | 100 | Plus |
| slam-RB | 3522 | CG9506-PB | 1..3519 | 86..3604 | 17595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| slam-RB | 4117 | CG9506-RB | 407..3994 | 17..3604 | 17940 | 100 | Plus |
| slam-RC | 3704 | CG9506-RC | 1..3581 | 24..3604 | 17905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6373508..6375311 | 17..1820 | 9005 | 99.9 | Plus |
| 2L | 23513712 | 2L | 6375372..6377161 | 1815..3604 | 8950 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:55:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6955 | 2995..3168 | 134 | 59.4 | Plus |
BO24926.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-11 10:33:28 Download gff for
BO24926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slam-RB | 380..3967 | 17..3606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:27 Download gff for
BO24926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slam-RB | 407..3994 | 17..3606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:49 Download gff for
BO24926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slam-RB | 407..3994 | 17..3606 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:49 Download gff for
BO24926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6373508..6375307 | 17..1816 | 100 | -> | Plus |
| 2L | 6375374..6377161 | 1817..3606 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:27 Download gff for
BO24926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6373508..6375307 | 17..1816 | 100 | -> | Plus |
| arm_2L | 6375374..6377161 | 1817..3606 | 99 | | Plus |
BO24926.pep Sequence
Translation from 16 to 3622
> BO24926.pep
MPESHSYKLKRLTSTTRQQTNTKMVLSNSTPNNQSKHNQMVVDTAAMNSD
DLSELLQLNAEIEERRRSSRHGDASTACGLLRATMTREELFEISSLDDDR
FLTALEYQNSFASPRRVQVTDLDLSSIENLMKYFDEEVPVTPTKTLGTTK
AAGNTGKVASTIAKLALQSDPVTPPKPKVGSGHLKISELKQKYEQLPEME
TPRSAYQASRKVSASLPMKVKEMAQLFNSKISQVMRRTEEPQYVQLQNEM
SPEVKAQNRLVSPLESPVQGPCLVAEEVFRELSVKDKALLFNKFIGDMAA
KHPKFTAHAADLKEKVNKQVARGEVVAERQASVKHLAQELEAKCILEPGS
PPRPGGVSPPKTTESKTETCTSQLHVSTLTVILKPSPERRAPQPRPRRCL
DRQSDEHAREPSQKRNLAAIRTMMPTEAYAPPKKIRRTRQERTGADSQMF
FQNEHLETLFYSWLSSENGVQFDITSVSDGQQTIEIATEEGNLLEQPLLE
PSTATLEDVSQKSAVERLLEEAIAKLELDNESKKETQVEEKKEMDTAQDP
IVQVTPRRIKRQAPPVPAPRPSLSQVTSSASSCKQSEAEESESGLSTLPK
ITSDESQPETPKDDLQTGEFDFAKPQRPPRKKKMRRTLTWKKENSIVEAT
AITSTDSDSDYKPPLSGAAKKKSGAICNPLPMPEPSFIELDKSLMRHLNS
PRKIKSAYTLTVMSSPSPNADSDQSPSQTPRQSLVQAMRDSFVDQGFETC
SNDPMDNSPIRRSSLGATESKPSGFSTPVKGRHASSPAQQQLFSPILIQE
RPRRSSLAMQVIREDHPLDLDATSSSPSTPCSEREFFANAPTVEIDNSQD
ESPTGKAHSMFWITSGDFTVSLEIFKNSPERLRLLYEIFTQKSWETRDLA
FGIDGHKFIRGAPSSDSVRQSLPERPPSVKGCSHYWFASGDLAVPFSGKL
MSSEKIERLFAFLSGEQSELRFGVDHIEFSSVPEFWPTTQKYSIESSYSI
LVGLQTGASNGLEGRSKYSWPNSSISANQAIKTSDLDQTEFESDSFGNNS
GRLSFSPDLFSLDYEAVPLDELFAKAPPSAATPAMSVPQMMQTLKQQQSK
LRSVEQRIRGYAKPANLADSSLEHCRNTPQYVHKLRSIIRAIDNIGRDDG
FRGCSMEQLESFMYFLSEYADVCLANCSEHMDKILDTLMDRRAVEVASFL
DH
BO24926.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| slam-PC | 1173 | CG9506-PC | 1..1173 | 24..1196 | 5990 | 100 | Plus |
| slam-PB | 1173 | CG9506-PB | 1..1173 | 24..1196 | 5990 | 100 | Plus |
