BO24934.complete Sequence
364 bp assembled on 2010-06-03
GenBank Submission: KX799511
> BO24934.complete
GAAGTTATCAGTCGACATGGGACGCATTTTCTTGGAACATCTTGGGGGTC
TGAAACTCTTCAATTGCGCCCAATGCCACACGAACCTGACCAACCGCAGT
CAATTGATCAGTACCCGATTCACAGGCGCAACAGGACGCGCCTATCTGTT
TAAGCGTGTGGTCAACCTGACCTTCAGCAACATCCAGGAACGGGTCATGC
TCACGGGTCGCCACATGGTGCGCGACGTTATGTGCAAGAATTGTGGAGCC
AAACTTGGCTGGATGTACGAGTTCGCCACCGAAGAGTCACAAAAGTGGGT
AAACGCGGATAGGCAGCTTGTCACTAGGGATTCTGGGTTATACAAGGCAA
GCTTTCTAGACCAT
BO24934.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:46:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Yippee-RB | 333 | CG1989-PB | 1..330 | 17..346 | 1650 | 100 | Plus |
Yippee-RA | 366 | CG1989-PA | 1..278 | 17..294 | 1390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:46:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Yippee-RB | 1293 | CG1989-RB | 341..670 | 17..346 | 1650 | 100 | Plus |
Yippee-RA | 1136 | CG1989-RA | 341..618 | 17..294 | 1390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:46:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13386537..13386752 | 346..131 | 1080 | 100 | Minus |
X | 23542271 | X | 13386814..13386932 | 135..17 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:46:37 has no hits.
BO24934.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:25 Download gff for
BO24934.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Yippee-RB | 318..647 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:53 Download gff for
BO24934.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Yippee-RB | 318..647 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:00 Download gff for
BO24934.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Yippee-RB | 341..670 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:00 Download gff for
BO24934.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13386535..13386748 | 135..348 | 99 | <- | Minus |
X | 13386815..13386932 | 17..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:53 Download gff for
BO24934.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13280568..13280781 | 135..348 | 99 | <- | Minus |
arm_X | 13280848..13280965 | 17..134 | 100 | | Minus |
BO24934.pep Sequence
Translation from 16 to 364
> BO24934.pep
MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVN
LTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKWVNADRQ
LVTRDSGLYKASFLDH
BO24934.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:41:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Yippee-PB | 110 | CG1989-PB | 1..110 | 1..110 | 585 | 100 | Plus |
Yippee-PA | 121 | CG1989-PA | 1..94 | 1..94 | 496 | 98.9 | Plus |
CG15309-PE | 114 | CG15309-PE | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PD | 114 | CG15309-PD | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PC | 114 | CG15309-PC | 14..95 | 13..94 | 204 | 45.1 | Plus |