BO24935.complete Sequence
793 bp assembled on 2010-06-03
GenBank Submission: KX797270
> BO24935.complete
GAAGTTATCAGTCGACATGGAATTTCCACACTTGGGACAGCACTGCAGTG
AGGCAACGTGCAACAGATTGGATTTTCTGCCCGTTAAGTGCGACTCGTGC
GACAAGGTCTTCTGCGCCTCTCACTACAGCTACGACCGCCACAGCTGTCC
AGGAGCCTACAAGAAGAACGTTCAGGTGCCCGTCTGCCCACTGTGTCGGG
AGCCCGTGCCCACGCCACCCGGAGTGGAGCCCGATGTCACTGTTGGCCAG
CACATTGACCAGCAGTGCAAATCGGAGAGCAAGAAGATCTACACCAATCG
CTGCAATGCCAAGGGCTGCAAGCGAAAGGAGCTCATCCCGGTGACCTGCT
CGCAGTGTCGCTTGAACTTTTGCCTGCGTCATCGACACACCAGCGACCAC
GACTGCAAGCCAGTGCCTGCATCTTCGACAACGTCCAGCCGTGGGGGATT
TCAGTCCATATTCAAGACCTCCTCGGACTCACGATCCATGGCTGCCCAGG
CGGCCGAGAGAAGGCAGAACAGAAGGCCCGCGAGCAATAGCATCAGCAAT
ACCAATTCCAGACCTCGACCTGTGCAGGCCACACAAGTACAAAACATACA
GGGCAATATGAGCGAAGACGAGGCCCTAGCACGAGCACTAGCCTTATCCA
TTATGGAGCAGGATGACGCGGCGGAAAGCAACCGTCAAGCTCCGGCACCA
AGCAACGCCCAGCAAGTGGCTGTTGGCGGTGGTGGCAATCAGCAGGGAAA
TGGCAAGGACAAGTGCCTGCTGTCCGCAAGCTTTCTAGACCAT
BO24935.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:46:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12795-RB | 762 | CG12795-PB | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:46:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12795-RB | 1072 | CG12795-RB | 151..910 | 16..775 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:46:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3452739..3453278 | 71..610 | 2700 | 100 | Plus |
| 2L | 23513712 | 2L | 3453428..3453593 | 610..775 | 830 | 100 | Plus |
| 2L | 23513712 | 2L | 3452616..3452671 | 16..71 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:46:49 has no hits.
BO24935.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:26 Download gff for
BO24935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 167..925 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:54 Download gff for
BO24935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 152..910 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:06 Download gff for
BO24935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 152..910 | 17..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:06 Download gff for
BO24935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3453429..3453593 | 611..777 | 98 | | Plus |
| 2L | 3452617..3452671 | 17..71 | 100 | -> | Plus |
| 2L | 3452740..3453278 | 72..610 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:54 Download gff for
BO24935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3452617..3452671 | 17..71 | 100 | -> | Plus |
| arm_2L | 3452740..3453278 | 72..610 | 100 | -> | Plus |
| arm_2L | 3453429..3453593 | 611..777 | 98 | | Plus |
BO24935.pep Sequence
Translation from 16 to 793
> BO24935.pep
MEFPHLGQHCSEATCNRLDFLPVKCDSCDKVFCASHYSYDRHSCPGAYKK
NVQVPVCPLCREPVPTPPGVEPDVTVGQHIDQQCKSESKKIYTNRCNAKG
CKRKELIPVTCSQCRLNFCLRHRHTSDHDCKPVPASSTTSSRGGFQSIFK
TSSDSRSMAAQAAERRQNRRPASNSISNTNSRPRPVQATQVQNIQGNMSE
DEALARALALSIMEQDDAAESNRQAPAPSNAQQVAVGGGGNQQGNGKDKC
LLSASFLDH
BO24935.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12795-PB | 253 | CG12795-PB | 1..253 | 1..253 | 1363 | 100 | Plus |
