BO24941.complete Sequence
661 bp assembled on 2010-06-03
GenBank Submission: KX794477
> BO24941.complete
GAAGTTATCAGTCGACATGAGTTCGCAATACTCGAATGTGGAGAACCTGT
CGCCGCAGACGATAAGGCAGGTGATGAGGGAGCTGCAGGAGATGGAAACC
ACGCCACCGGAAGGCATCAAGGTGCTAATCAATGAGAGCGATGTGACGGA
TATTCAGGCATTGATCGATGGACCTGCTGGCACTCCGTACGCCGCTGGAA
TTTTCCGCGTCAAACTGACGCTGAACAAGGACTTCCCGCTGACGCCACCC
AAGGCGTACTTCCTCACCAAGATCTTTCATCCGAATGTGGCCGCCAACGG
GGAGATCTGTGTGAACACACTAAAGAAGGACTGGAAGCCGGATCTGGGCA
TCAAGCACATTCTGCTCACCATCAAATGCCTGCTTATTGTCCCGAATCCG
GAATCGGCGCTGAACGAGGAGGCCGGCAAGATGCTGTTGGAACGATACGA
TGACTACTCACAGAGGGCGCGCATGATGACAGAGATCCATGCCCAGCCTG
CCAAATGCGGTGTAGGCGCTGTTGGCGATGCCAAAGACGATGGTGGACCC
TCGACGAAGAAGCATGCGGGCCTGGACAAGAAGCTGCAGGACAAGAAGAA
GGAGAAGTTGCTCAAGGAGAAGAAACGCATGCTGAAGAGATTAGCAAGCT
TTCTAGACCAT
BO24941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:47:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8188-RD | 630 | CG8188-PD | 1..627 | 17..643 | 3135 | 100 | Plus |
| CG8188-RC | 630 | CG8188-PC | 1..627 | 17..643 | 3135 | 100 | Plus |
| CG8188-RB | 630 | CG8188-PB | 1..627 | 17..643 | 3135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:47:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8188-RD | 3297 | CG8188-RD | 568..1195 | 16..643 | 3140 | 100 | Plus |
| CG8188-RC | 2442 | CG8188-RC | 568..1195 | 16..643 | 3140 | 100 | Plus |
| CG8188-RB | 2119 | CG8188-RB | 568..1195 | 16..643 | 3140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17701306..17701777 | 496..25 | 2360 | 100 | Minus |
| X | 23542271 | X | 17701019..17701167 | 643..495 | 745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:47:00 has no hits.
BO24941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:27 Download gff for
BO24941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8188-RB | 753..1379 | 17..645 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:57 Download gff for
BO24941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8188-RA | 753..1379 | 17..645 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:13 Download gff for
BO24941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8188-RB | 569..1195 | 17..645 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:13 Download gff for
BO24941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17701016..17701165 | 497..645 | 98 | <- | Minus |
| X | 17701306..17701777 | 25..496 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:57 Download gff for
BO24941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17595049..17595198 | 497..645 | 98 | <- | Minus |
| arm_X | 17595339..17595810 | 25..496 | 100 | | Minus |
BO24941.pep Sequence
Translation from 16 to 661
> BO24941.pep
MSSQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALI
DGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVN
TLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQR
ARMMTEIHAQPAKCGVGAVGDAKDDGGPSTKKHAGLDKKLQDKKKEKLLK
EKKRMLKRLASFLDH
BO24941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:41:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8188-PD | 209 | CG8188-PD | 1..209 | 1..209 | 1083 | 100 | Plus |
| CG8188-PC | 209 | CG8188-PC | 1..209 | 1..209 | 1083 | 100 | Plus |
| CG8188-PB | 209 | CG8188-PB | 1..209 | 1..209 | 1083 | 100 | Plus |
| CG8188-PA | 209 | CG8188-PA | 1..209 | 1..209 | 1083 | 100 | Plus |
| ben-PE | 151 | CG18319-PE | 6..148 | 17..159 | 262 | 33.6 | Plus |
