BO24948.complete Sequence
1081 bp assembled on 2010-06-03
GenBank Submission: KX799150
> BO24948.complete
GAAGTTATCAGTCGACATGGATGTTGTTAAAGAAGTTCTGGCCAAACACC
AAAAGGAATTGGACAAATACAAGCCGATCACAGTAGAAAAGCATTTGGAA
TGCCGACTCGACGTTGGCAGCCTGCTGATCACAGATCCCAACGATTTCGA
TGACCGGGAATTGAGGGACAACAAAGAGGAGTACCTGACCGCACTGACAC
GGGAGAACACCCAACTTTTGGTCAATGCCATTTGGGAGTTGCCCACCGAA
CGGGTAGACGAGAGCATTGTGGCCAAGCTGCCGGAACCCACGACGGTACT
GCCCCGCCTCCGTAAGCCGCCAGGTCCACGTCCGCTCACCAAATGGGAGA
AGTTCGCCAAGGAGAAGGGTATCAGCAAGAAGAAGAAGGACAAGAAGACC
TACGATGAGACCATGGATAAATGGGTGCCTACATATGGTTTTAAGCGTGC
CGAGGCCGAGAAGGCCAAGGATTGGGTGCTGGAGGTGCCACAGAACGCCG
ATCCCAATACGGACATGTTCCAGAAGAAGATCGACCTGCGCAACGAGAAG
GTGGCCAAGAATGAGATCCAGCGGATGAAGAACATTGTGCGCGCCAAGAA
GATCGACATGCCACGCAGCGGTTACTTGGGACCCGAGGCTGCCTCATCCA
GCCAGTTGTTAACGGCCGTCACTGTGGCCAAATCCTCCACAGCCTCAGTC
GGCAAATTCCAAAACAAACTGCCCAAGGAGAAGGAGGCACGTGGTCTGGG
CATTAAAGAGCTGATTCCCGGCGGCAAACGCAAGCAGTCGCATATCACAC
AAACGCCGGAGAAGGAGGCCAACCTGGATCTCATCAAGAGCGTGCTGAAC
AAGAAGCCCAAACTGGACGTGAGCAAGGCGGTATCGATGGAGAAGCGCGA
CAATCGCTTGGCACGCGAAGCAGAGGCTGAGAATGAACCAGGCAAGAAGG
GCGGCAAGAAGCCCAAGGGCAAGGGCAGTCGCAAGGCGGTGGGCAAGAAG
TCCAAGGGCAATCGTGGTCAAAGGGCTCCGGGCAAGAAGGCGCAAGCCGG
TCGCAAACGTCGCGCAAGCTTTCTAGACCAT
BO24948.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:48:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32409-RA | 1050 | CG32409-PA | 1..1047 | 17..1063 | 5235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:48:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32409-RA | 1231 | CG32409-RA | 72..1118 | 17..1063 | 5235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:48:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5900115..5900608 | 419..912 | 2470 | 100 | Plus |
| 3L | 28110227 | 3L | 5899803..5900057 | 164..418 | 1275 | 100 | Plus |
| 3L | 28110227 | 3L | 5900673..5900823 | 913..1063 | 755 | 100 | Plus |
| 3L | 28110227 | 3L | 5899599..5899748 | 17..166 | 750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:48:32 has no hits.
BO24948.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:43 Download gff for
BO24948.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32409-RA | 58..1104 | 17..1065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:09 Download gff for
BO24948.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32409-RA | 72..1118 | 17..1065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:52 Download gff for
BO24948.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32409-RA | 72..1118 | 17..1065 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:52 Download gff for
BO24948.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5899599..5899747 | 17..165 | 100 | -> | Plus |
| 3L | 5899805..5900057 | 166..418 | 100 | -> | Plus |
| 3L | 5900115..5900608 | 419..912 | 100 | -> | Plus |
| 3L | 5900673..5900823 | 913..1065 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:09 Download gff for
BO24948.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5892905..5893157 | 166..418 | 100 | -> | Plus |
| arm_3L | 5892699..5892847 | 17..165 | 100 | -> | Plus |
| arm_3L | 5893215..5893708 | 419..912 | 100 | -> | Plus |
| arm_3L | 5893773..5893923 | 913..1065 | 98 | | Plus |
BO24948.pep Sequence
Translation from 16 to 1081
> BO24948.pep
MDVVKEVLAKHQKELDKYKPITVEKHLECRLDVGSLLITDPNDFDDRELR
DNKEEYLTALTRENTQLLVNAIWELPTERVDESIVAKLPEPTTVLPRLRK
PPGPRPLTKWEKFAKEKGISKKKKDKKTYDETMDKWVPTYGFKRAEAEKA
KDWVLEVPQNADPNTDMFQKKIDLRNEKVAKNEIQRMKNIVRAKKIDMPR
SGYLGPEAASSSQLLTAVTVAKSSTASVGKFQNKLPKEKEARGLGIKELI
PGGKRKQSHITQTPEKEANLDLIKSVLNKKPKLDVSKAVSMEKRDNRLAR
EAEAENEPGKKGGKKPKGKGSRKAVGKKSKGNRGQRAPGKKAQAGRKRRA
SFLDH
BO24948.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32409-PA | 349 | CG32409-PA | 1..349 | 1..349 | 1792 | 100 | Plus |
