BO24949.complete Sequence
802 bp assembled on 2010-06-03
GenBank Submission: KX798041
> BO24949.complete
GAAGTTATCAGTCGACATGTCTGATTCTGCAGTTGCAACGTCCGCTTCCC
CAGTGGCTGCCCCACCAGCGACAGTTGAGAAGAAAGTGGTCCAAAAAAAG
GCATCTGGATCTGCTGGCACAAAGGCAAAGAAAGCCTCTGCGACGCCGTC
ACATCCGCCAACTCAGCAAATGGTGGACGCTTCCATTAAAAATTTAAAGG
AACGTGGCGGTTCATCACTTCTGGCAATCAAAAAATATATCACTGCCACT
TATAAATGCGACGCCCAAAAGTTAGCGCCATTCATCAAGAAGTACTTAAA
ATCGGCCGTGGTCAATGGAAAGCTTATTCAAACTAAGGGAAAGGGTGCAT
CTGGATCTTTCAAACTGTCGGCCTCTGCCAAGAAGGAAAAGGATCCGAAG
GCAAAGTCGAAGGTTTTGTCTGCTGAGAAAAAAGTTCAAAGCAAGAAGGT
AGCCTCTAAGAAGATTGGTGTCTCCTCCAAAAAAACTGCCGTTGGGGCTG
CTGACAAAAAGCCCAAAGCTAAGAAGGCTGTGGCTACCAAAAAGACTGCC
GAAAATAAGAAAACTGAGAAGGCAAAAGCCAAGGATGCCAAGAAAACTGG
AATCATAAAGTCGAAGCCCGCCGCAACAAAGGCGAAAGTGACTGCAGCGA
AGCCAAAGGCTGTAATAGCGAAAGCGTCAAAGGCAAAGCCAGCGGTGTCT
GCAAAACCCAAAAAGACGGTGAAGAAAGCATCGGTTTCTGCTACCGCCAA
GAAGCCGAAAGCGAAGACTACGGCTGCCAAAAAGGCAAGCTTTCTAGACC
AT
BO24949.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:48:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His1:CG33864-RA | 771 | CG33864-PA | 1..768 | 17..784 | 3825 | 99.9 | Plus |
His1:CG33852-RA | 771 | CG33852-PA | 1..768 | 17..784 | 3825 | 99.9 | Plus |
His1:CG33849-RA | 771 | CG33849-PA | 1..768 | 17..784 | 3825 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:48:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His1:CG33864-RA | 1023 | CG33864-RA | 160..927 | 17..784 | 3825 | 99.9 | Plus |
His1:CG33852-RA | 1023 | CG33852-RA | 160..927 | 17..784 | 3825 | 99.9 | Plus |
His1:CG33849-RA | 1023 | CG33849-RA | 160..927 | 17..784 | 3825 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:48:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21427075..21427842 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21501792..21502559 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21491700..21492467 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21496745..21497512 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21506843..21507610 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21511887..21512654 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21516932..21517699 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21536505..21537272 | 17..784 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21417112..21417879 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21432122..21432889 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21437170..21437937 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21456272..21457039 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21461332..21462099 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21466375..21467142 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21471418..21472185 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21476461..21477228 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21481504..21482271 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21521775..21522542 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21526618..21527385 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21531461..21532228 | 17..784 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21422014..21422781 | 17..784 | 3795 | 99.6 | Plus |
2L | 23513712 | 2L | 21451211..21451978 | 17..784 | 3795 | 99.6 | Plus |
2L | 23513712 | 2L | 21486655..21487422 | 17..784 | 3795 | 99.6 | Plus |
2L | 23513712 | 2L | 21543023..21543688 | 17..682 | 3255 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:48:40 has no hits.
BO24949.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:44 Download gff for
BO24949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His1:CG33840-RA | 35..802 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:11 Download gff for
BO24949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His1:CG33846-RA | 160..927 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:55 Download gff for
BO24949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His1:CG33849-RA | 160..927 | 17..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:55 Download gff for
BO24949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21427075..21427842 | 17..786 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:11 Download gff for
BO24949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21427075..21427842 | 17..786 | 99 | | Plus |
BO24949.pep Sequence
Translation from 16 to 802
> BO24949.pep
MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQ
QMVDASIKNLKERGGSSLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVN
GKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKKVQSKKVASKKI
GVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGIIKSK
PAATKAKVTAAKPKAVIAKASKAKPAVSAKPKKTVKKASVSATAKKPKAK
TTAAKKASFLDH
BO24949.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His1:CG33861-PA | 256 | CG33861-PA | 1..256 | 1..256 | 1230 | 100 | Plus |
His1:CG33858-PA | 256 | CG33858-PA | 1..256 | 1..256 | 1230 | 100 | Plus |
His1:CG33855-PA | 256 | CG33855-PA | 1..256 | 1..256 | 1230 | 100 | Plus |
His1:CG33864-PA | 256 | CG33864-PA | 1..256 | 1..256 | 1229 | 99.6 | Plus |
His1:CG33852-PA | 256 | CG33852-PA | 1..256 | 1..256 | 1229 | 99.6 | Plus |