Clone BO24949 Report

Search the DGRC for BO24949

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:249
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptHis1:CG33855-RA
Protein status:BO24949.pep: Imported from assembly
Sequenced Size:802

Clone Sequence Records

BO24949.complete Sequence

802 bp assembled on 2010-06-03

GenBank Submission: KX798041

> BO24949.complete
GAAGTTATCAGTCGACATGTCTGATTCTGCAGTTGCAACGTCCGCTTCCC
CAGTGGCTGCCCCACCAGCGACAGTTGAGAAGAAAGTGGTCCAAAAAAAG
GCATCTGGATCTGCTGGCACAAAGGCAAAGAAAGCCTCTGCGACGCCGTC
ACATCCGCCAACTCAGCAAATGGTGGACGCTTCCATTAAAAATTTAAAGG
AACGTGGCGGTTCATCACTTCTGGCAATCAAAAAATATATCACTGCCACT
TATAAATGCGACGCCCAAAAGTTAGCGCCATTCATCAAGAAGTACTTAAA
ATCGGCCGTGGTCAATGGAAAGCTTATTCAAACTAAGGGAAAGGGTGCAT
CTGGATCTTTCAAACTGTCGGCCTCTGCCAAGAAGGAAAAGGATCCGAAG
GCAAAGTCGAAGGTTTTGTCTGCTGAGAAAAAAGTTCAAAGCAAGAAGGT
AGCCTCTAAGAAGATTGGTGTCTCCTCCAAAAAAACTGCCGTTGGGGCTG
CTGACAAAAAGCCCAAAGCTAAGAAGGCTGTGGCTACCAAAAAGACTGCC
GAAAATAAGAAAACTGAGAAGGCAAAAGCCAAGGATGCCAAGAAAACTGG
AATCATAAAGTCGAAGCCCGCCGCAACAAAGGCGAAAGTGACTGCAGCGA
AGCCAAAGGCTGTAATAGCGAAAGCGTCAAAGGCAAAGCCAGCGGTGTCT
GCAAAACCCAAAAAGACGGTGAAGAAAGCATCGGTTTCTGCTACCGCCAA
GAAGCCGAAAGCGAAGACTACGGCTGCCAAAAAGGCAAGCTTTCTAGACC
AT

BO24949.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:48:41
Subject Length Description Subject Range Query Range Score Percent Strand
His1:CG33864-RA 771 CG33864-PA 1..768 17..784 3825 99.9 Plus
His1:CG33852-RA 771 CG33852-PA 1..768 17..784 3825 99.9 Plus
His1:CG33849-RA 771 CG33849-PA 1..768 17..784 3825 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
His1:CG33864-RA 1023 CG33864-RA 160..927 17..784 3825 99.9 Plus
His1:CG33852-RA 1023 CG33852-RA 160..927 17..784 3825 99.9 Plus
His1:CG33849-RA 1023 CG33849-RA 160..927 17..784 3825 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:48:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21427075..21427842 17..784 3825 99.9 Plus
2L 23513712 2L 21501792..21502559 17..784 3825 99.9 Plus
2L 23513712 2L 21491700..21492467 17..784 3825 99.9 Plus
2L 23513712 2L 21496745..21497512 17..784 3825 99.9 Plus
2L 23513712 2L 21506843..21507610 17..784 3825 99.9 Plus
2L 23513712 2L 21511887..21512654 17..784 3825 99.9 Plus
2L 23513712 2L 21516932..21517699 17..784 3825 99.9 Plus
2L 23513712 2L 21536505..21537272 17..784 3825 99.9 Plus
2L 23513712 2L 21417112..21417879 17..784 3810 99.7 Plus
2L 23513712 2L 21432122..21432889 17..784 3810 99.7 Plus
2L 23513712 2L 21437170..21437937 17..784 3810 99.7 Plus
2L 23513712 2L 21456272..21457039 17..784 3810 99.7 Plus
2L 23513712 2L 21461332..21462099 17..784 3810 99.7 Plus
2L 23513712 2L 21466375..21467142 17..784 3810 99.7 Plus
2L 23513712 2L 21471418..21472185 17..784 3810 99.7 Plus
2L 23513712 2L 21476461..21477228 17..784 3810 99.7 Plus
2L 23513712 2L 21481504..21482271 17..784 3810 99.7 Plus
2L 23513712 2L 21521775..21522542 17..784 3810 99.7 Plus
2L 23513712 2L 21526618..21527385 17..784 3810 99.7 Plus
2L 23513712 2L 21531461..21532228 17..784 3810 99.7 Plus
2L 23513712 2L 21422014..21422781 17..784 3795 99.6 Plus
2L 23513712 2L 21451211..21451978 17..784 3795 99.6 Plus
2L 23513712 2L 21486655..21487422 17..784 3795 99.6 Plus
2L 23513712 2L 21543023..21543688 17..682 3255 99.2 Plus
Blast to na_te.dros performed on 2014-11-28 04:48:40 has no hits.

BO24949.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:44 Download gff for BO24949.complete
Subject Subject Range Query Range Percent Splice Strand
His1:CG33840-RA 35..802 17..786 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:11 Download gff for BO24949.complete
Subject Subject Range Query Range Percent Splice Strand
His1:CG33846-RA 160..927 17..786 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:55 Download gff for BO24949.complete
Subject Subject Range Query Range Percent Splice Strand
His1:CG33849-RA 160..927 17..786 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:55 Download gff for BO24949.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21427075..21427842 17..786 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:11 Download gff for BO24949.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21427075..21427842 17..786 99   Plus

BO24949.pep Sequence

Translation from 16 to 802

> BO24949.pep
MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQ
QMVDASIKNLKERGGSSLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVN
GKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKKVQSKKVASKKI
GVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGIIKSK
PAATKAKVTAAKPKAVIAKASKAKPAVSAKPKKTVKKASVSATAKKPKAK
TTAAKKASFLDH

BO24949.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:36
Subject Length Description Subject Range Query Range Score Percent Strand
His1:CG33861-PA 256 CG33861-PA 1..256 1..256 1230 100 Plus
His1:CG33858-PA 256 CG33858-PA 1..256 1..256 1230 100 Plus
His1:CG33855-PA 256 CG33855-PA 1..256 1..256 1230 100 Plus
His1:CG33864-PA 256 CG33864-PA 1..256 1..256 1229 99.6 Plus
His1:CG33852-PA 256 CG33852-PA 1..256 1..256 1229 99.6 Plus