BO24964.complete Sequence
1180 bp assembled on 2010-06-03
GenBank Submission: KX796244
> BO24964.complete
GAAGTTATCAGTCGACATGCAGGCCCATCATGCGATGCCCGATTTCCGAT
GCCGGAATAATTGCCAGCACAAGGAGTGCCAGAGGCATGCTCCTTTGGGC
ATAATCGATCAGCACACCCAGTGCAAGTGCTTGGGCGAGGTAAATGCCTC
ATCGATTTTCCTAGAAAATGTCCTGGACCTGGCCAACACTTTGGCCCAGG
TGATGATCATCTGTGGACTGCACGAGTGCAAAGCGAAATCAACCGTGGAC
ATTATCACATATGCCTTCTTGCATTACGATCAGGTGTGCTATTGCATTGA
TACCACGCCCAAGAAGCGACTGAGAAAGGAGGATTTGTTCCACGAGCTGG
GCAAGAAGTCGCTGATGAACAAGGTGGAGGCCCACTTGGCCTATGCCATC
ATCAAGAGGGGATTCAAGGCCTTCTACTACGAGCCGAAAGTGGACTTGAC
CTACGATGAGCAAGGCAGACCCTCGTACAACGATGAATGCGTCTGGGTCC
ACGCAGCCAGGAAGTCAGCCGAGTCCTATGCCCGCTTCGATGGCCTCTCC
TGCGCCGAACAGTTGGCATACGAGGCCAAGATCAAAATAGCCTTCAAGAA
GTTCTACGATCGCATGCAGACGCGCAAGAGGCAGCCGGAGGGCGACGATT
GCAACTGCTGCTTCTGTGCCAAGAAGCGGGGACATCTGGTCTATGCCAAG
GAACCGACTCCCTGCACTTCCAACAAAAAGAAGCCCAAGCACGTGTGTCC
ATATTGCTGCAAGAAGAAGCAGAAGCAGCAGTACACACACCCTGCTCGCC
AGCCGGCCAAGTGCCCCAAGTGCCACAAGTCGCGCAAGTTCTGCTGCTGC
ACCAAAATGGACTTCAACTTGCAGTGGGTCAAGAGCATATGGGAGCGGCC
GGACTTCAATCAGTACTACAAGAACGAGATCGCCGAAATCGAGGACCGCC
TGGTCAAGGGAACCTGCTGGCTGCCGCCGGAGCCTGAGGAGAAGCTGCTC
GATGAGGGCGAGGGCGAGGAGGAGGAGGAAGCCCACCAGGAAATGTCGCC
GGAGGCTCTCCTCGCCCTCGGCGGCAAAACGGTGCCCACTATACCGGATG
AAGGAAACGGTTCTCCACTGGCCACCAAACAGCCGTCGATCACCGAGGGT
GAGGGCGAGACCGCAAGCTTTCTAGACCAT
BO24964.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:50:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3517-RA | 1149 | CG3517-PA | 1..1146 | 17..1162 | 5730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:50:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3517-RA | 1421 | CG3517-RA | 143..1288 | 17..1162 | 5730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:50:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19423912..19425057 | 1162..17 | 5730 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:50:30 has no hits.
BO24964.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:51 Download gff for
BO24964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3517-RA | 143..1288 | 17..1164 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:20 Download gff for
BO24964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3517-RA | 143..1288 | 17..1164 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:58:44 Download gff for
BO24964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3517-RA | 143..1288 | 17..1164 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:58:44 Download gff for
BO24964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19423910..19425057 | 17..1164 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:20 Download gff for
BO24964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15249632..15250779 | 17..1164 | 99 | | Minus |
BO24964.pep Sequence
Translation from 16 to 1180
> BO24964.pep
MQAHHAMPDFRCRNNCQHKECQRHAPLGIIDQHTQCKCLGEVNASSIFLE
NVLDLANTLAQVMIICGLHECKAKSTVDIITYAFLHYDQVCYCIDTTPKK
RLRKEDLFHELGKKSLMNKVEAHLAYAIIKRGFKAFYYEPKVDLTYDEQG
RPSYNDECVWVHAARKSAESYARFDGLSCAEQLAYEAKIKIAFKKFYDRM
QTRKRQPEGDDCNCCFCAKKRGHLVYAKEPTPCTSNKKKPKHVCPYCCKK
KQKQQYTHPARQPAKCPKCHKSRKFCCCTKMDFNLQWVKSIWERPDFNQY
YKNEIAEIEDRLVKGTCWLPPEPEEKLLDEGEGEEEEEAHQEMSPEALLA
LGGKTVPTIPDEGNGSPLATKQPSITEGEGETASFLDH
BO24964.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3517-PA | 382 | CG3517-PA | 1..382 | 1..382 | 2118 | 100 | Plus |
CG13872-PA | 613 | CG13872-PA | 40..207 | 49..214 | 281 | 32.1 | Plus |
CG9173-PA | 433 | CG9173-PA | 26..287 | 36..278 | 259 | 28.9 | Plus |