BO24987.complete Sequence
556 bp assembled on 2010-06-03
GenBank Submission: KX797384
> BO24987.complete
GAAGTTATCAGTCGACATGTCCGCCCTAAAAAAATTTTATAAAATCAGCG
CAGGTGTGAGAAGAGGCGCACTACTTACCAGTTCCCGAAGAACACAAATT
GATGCTTTAAATAGTCCACAATTGCAGTTGCAAGTGCATCACTTTGCAAC
CAAAACACAAACAGCTGTTTTTAGCAGCAGCAACAACTACACGTGCATTT
GCCGCAGTATACACTGCAGTAAGCCAGTGGACGATGCGGACAAGACGGTG
GCCACGAATAGCATTCCTCTGGCGAAACTGGAGGCCAAGATGCAGCTGAT
CTACACCTGCAAGGTGTGCCAGACCCGGAACATGAAGACCATTTCGAAGC
TGGCATACCAACGCGGCGTTGTTATCGTGACCTGCGAGGGCTGCTCCAAT
CACCACCTGATCGCCGACAATCTGAACTGGTTCACAGATCTGGACGGCAA
GCGCAACATCGAGGAGATCCTGGCCGAGAAGGGCGAGAAGGTGGTTCGCC
TGACCGATGGCAACTGCGAGTTTTTGCCGAAACATGATGCAAGCTTTCTA
GACCAT
BO24987.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12379-RB | 525 | CG12379-PB | 1..522 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:48:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12379-RB | 618 | CG12379-RB | 74..595 | 17..538 | 2610 | 100 | Plus |
| CG8191-RA | 1486 | CG8191-RA | 1068..1377 | 538..229 | 1550 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:48:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15733245..15733554 | 538..229 | 1550 | 100 | Minus |
| X | 23542271 | X | 15733710..15733923 | 230..17 | 1070 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 04:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6866 | 116..228 | 127 | 60.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6879 | 116..221 | 109 | 58.6 | Plus |
BO24987.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:34 Download gff for
BO24987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 17..538 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:06 Download gff for
BO24987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 74..595 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:45 Download gff for
BO24987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 74..595 | 17..540 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:45 Download gff for
BO24987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15733243..15733553 | 230..540 | 99 | <- | Minus |
| X | 15733711..15733923 | 17..229 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:06 Download gff for
BO24987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15627276..15627586 | 230..540 | 99 | <- | Minus |
| arm_X | 15627744..15627956 | 17..229 | 100 | | Minus |
BO24987.pep Sequence
Translation from 16 to 556
> BO24987.pep
MSALKKFYKISAGVRRGALLTSSRRTQIDALNSPQLQLQVHHFATKTQTA
VFSSSNNYTCICRSIHCSKPVDDADKTVATNSIPLAKLEAKMQLIYTCKV
CQTRNMKTISKLAYQRGVVIVTCEGCSNHHLIADNLNWFTDLDGKRNIEE
ILAEKGEKVVRLTDGNCEFLPKHDASFLDH
BO24987.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:42:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12379-PB | 174 | CG12379-PB | 1..174 | 1..174 | 909 | 100 | Plus |
| CG8206-PB | 191 | CG8206-PB | 97..179 | 87..159 | 194 | 44.6 | Plus |
| CG8206-PA | 191 | CG8206-PA | 97..179 | 87..159 | 194 | 44.6 | Plus |
