BO24989.complete Sequence
1003 bp assembled on 2010-06-03
GenBank Submission: KX794061
> BO24989.complete
GAAGTTATCAGTCGACATGGAATTTCTGGAGAACCTGTACAAAACGCTGC
ACTCCCTGTTGTCCTCCTACATCGATCTGGACTATTCGCTATGGCTATAT
CGCTTCCTCACCCCCCTGATTGTCACCTTTCTGCTGCCGCTGGTCTTCGT
GGCCCTCATCTACATTTCGTTCCTGGTGCTATTCATCTACAAGCTGCACA
GGCAGGTAATAATGCGCGCCGTGCAGGGCGATCGCAATTTTTGGCGAGTG
GGCCGCAAGATAGTGGCCGCCATTTGGGATGCACATGCTCGGATCTATCA
TGGCTACGAGGTGATCGGATTGGAGAATGTGCCACAGGAGGGACCGGCGC
TGATTGTCTACTATCATGGCGCCATACCCATCGATATGTACTACTTGAAT
TCGCGAATGTTGCTGCAGCGCGAGCGTTTGATCTACACGATCGGCGATCG
ATTTCTGTTCAAGCTGCCCGGCTGGGGCACCATCTCTGAGGCATTCCACG
TCAGTCCCGGCACGGTGCAGTCGTGCGTTAGCATTTTGCGGGATGGCAAT
CTGCTGGCCATTTCGCCGGGCGGCGTTTATGAGGCACAGTTCGGTGATCA
CTACTACGAGCTGTTGTGGCGCAATCGTGTCGGTTTCGCCAAGGTGGCCA
TCGAGGCAAAGGCGCCCATCATTCCCTGCTTTACGCAGAATCTGCGCGAG
GGCTTCCGTCAGGTGGGCATCTTTCGGACGTTCTTCATGCGACTGTACAA
TAAGGTGCGCATACCGGTGTATCCCATCTACGGTGGCTTTCCCGTCAAGT
TTCGGACGTATCTGGGCAAGCCTATACCCTACGATGAGAACCTAACCCCG
CAGGATCTGCAAATCAAGGTGGCTACGGCTATCGAGGATCTGATCAATCA
ACACCAGCGACTGCCCGGCAGCATCCTGCTGGCTCTGCTGGATCGACTGC
CCACGTTTAGGCGACGCGTACGGCGGAAGGAGGAGGCAAGCTTTCTAGAC
CAT
BO24989.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34348-RA | 972 | CG34348-PA | 1..969 | 17..985 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34348-RA | 2190 | CG34348-RA | 580..1548 | 17..985 | 4845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11343243..11343915 | 199..871 | 3365 | 100 | Plus |
| X | 23542271 | X | 11340607..11340746 | 63..202 | 700 | 100 | Plus |
| X | 23542271 | X | 11343974..11344092 | 867..985 | 595 | 100 | Plus |
| X | 23542271 | X | 11340452..11340497 | 17..62 | 230 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2190..2240 | 160..110 | 111 | 68.6 | Minus |
BO24989.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:35 Download gff for
BO24989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34348-RA | 1..969 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:43 Download gff for
BO24989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34348-RA | 580..1548 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:14 Download gff for
BO24989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34348-RA | 580..1548 | 17..987 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:14 Download gff for
BO24989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11340452..11340497 | 17..62 | 100 | -> | Plus |
| X | 11340607..11340745 | 63..201 | 100 | -> | Plus |
| X | 11343246..11343912 | 202..868 | 100 | -> | Plus |
| X | 11343976..11344092 | 869..987 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:43 Download gff for
BO24989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11234485..11234530 | 17..62 | 100 | -> | Plus |
| arm_X | 11234640..11234778 | 63..201 | 100 | -> | Plus |
| arm_X | 11237279..11237945 | 202..868 | 100 | -> | Plus |
| arm_X | 11238009..11238125 | 869..987 | 98 | | Plus |
BO24989.pep Sequence
Translation from 16 to 1003
> BO24989.pep
MEFLENLYKTLHSLLSSYIDLDYSLWLYRFLTPLIVTFLLPLVFVALIYI
SFLVLFIYKLHRQVIMRAVQGDRNFWRVGRKIVAAIWDAHARIYHGYEVI
GLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKL
PGWGTISEAFHVSPGTVQSCVSILRDGNLLAISPGGVYEAQFGDHYYELL
WRNRVGFAKVAIEAKAPIIPCFTQNLREGFRQVGIFRTFFMRLYNKVRIP
VYPIYGGFPVKFRTYLGKPIPYDENLTPQDLQIKVATAIEDLINQHQRLP
GSILLALLDRLPTFRRRVRRKEEASFLDH
BO24989.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34348-PA | 323 | CG34348-PA | 1..323 | 1..323 | 1694 | 100 | Plus |
