BO25006.complete Sequence
1195 bp assembled on 2010-06-03
GenBank Submission: KX795830
> BO25006.complete
GAAGTTATCAGTCGACATGGAACAGTCTCAGTCTCAACGGCAGGCGTGGC
CTTCGTCCTCCGCGGGGGGTGGCAAGGCCCAGGACTCCGGGGTGCTGACG
CGCGAGGACTTCGACGGCGGACCGGTCAGCATCGACGAGGTGGACACAGG
CCTGTTTCTAGGCAACCTGACCGCGGCGACGCACATGGAGACGCTGCGCT
CCTTCAAGATCACCCACATCCTCACGCTGGATTCGGTCCCGCTGCCGCAG
CACATTCTGGAGGCCAGCTTTCTGACCACCAAATATATACAGATTGCCGA
CATGCCGCGCGAAGATATTCTGCAGCATCTGGAGGGCTGCGTTGACTTTA
TCAGCTCGGCCCTGGCCCAGCAGGGCAATGTCCTTGTGCACTGCTACTTC
GGCGTCAGTCGCAGCTCATCCACTGTGATCGCTTACATGATGAAGCGACA
CAATCTGGACTTCCTGCCCGCCTACGAGCTGGTCAAGGCCAAACGGCGCT
TCGTCCAGCCAAACGCTGGCTTTGTCAGCCAACTAAAGCTCTTCCGGCGC
ATGGGCTGCAAGATTGACCCCAACTGCCAGCGCTACAAGATCCATCGCCT
GCGCCTGGCTGGCGAGCAGATGCGCAAGGCCAAGATCCTGCCGCAAAGCT
TCCACAGCGTGGTCCGTCCGGATCCAGATATAACGCGCGAGAACCCGGAG
CCCATAGTGTTCCGCTGTCGTCGTTGCCGCCGCGTCCTCGCCTCCAAGTC
GCATGTACTGGAGCACAAGCCGCGTGACAGGCCGCCGCAGGAGGTGGTAC
CCAAGGAGAAAGAAGAAGTCGCTGCAGCTAAGCTGCCGGCTCAGTCACAT
GATCAGGCCGAAAATCATCATGGTGCTCGCATGCTGGAGCAGCTGTCCGA
GCGCATCCGCCAGTCATCACTCGGTTCACCCGGCCACGAAAGCACGCCAA
ACTATTGCCGCAGCATACTGTTTGTGGAGCCCATCGCCTGGATGCACCGC
ATCATGCTGAACACCCAGGGCCGCCTGTACTGTCCCAAGTGCGAGCAGAA
ATTGGGAAACTTTAGCTGGATCAACGCCTGCAAGTGTCCGTGCGGGGAGA
CGATGACGCCTGCATTTTATCTGATACCTTCCAAGGTGGAGCTCTCGAAG
GCCGTGCAGAACGTGCAGACCACGGTTGCAAGCTTTCTAGACCAT
BO25006.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:52:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MKP-4-RC | 1164 | CG14211-PC | 1..1161 | 17..1177 | 5805 | 100 | Plus |
| MKP-4-RB | 1164 | CG14211-PB | 1..1161 | 17..1177 | 5805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:52:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MKP-4-RC | 1815 | CG14211-RC | 83..1244 | 16..1177 | 5810 | 100 | Plus |
| MKP-4-RB | 2358 | CG14211-RB | 96..1257 | 16..1177 | 5810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:52:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19623779..19624462 | 393..1076 | 3420 | 100 | Plus |
| X | 23542271 | X | 19623209..19623355 | 16..162 | 735 | 100 | Plus |
| X | 23542271 | X | 19623415..19623548 | 160..293 | 670 | 100 | Plus |
| X | 23542271 | X | 19624527..19624628 | 1076..1177 | 510 | 100 | Plus |
| X | 23542271 | X | 19623615..19623714 | 294..393 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:52:24 has no hits.
BO25006.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 14:00:01 Download gff for
BO25006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14211-RB | 97..1257 | 17..1179 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:30 Download gff for
BO25006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MKP-4-RB | 97..1257 | 17..1179 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:24 Download gff for
BO25006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MKP-4-RB | 97..1257 | 17..1179 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:24 Download gff for
BO25006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19623210..19623354 | 17..161 | 100 | -> | Plus |
| X | 19623417..19623548 | 162..293 | 100 | -> | Plus |
| X | 19623615..19623714 | 294..393 | 100 | -> | Plus |
| X | 19623780..19624462 | 394..1076 | 100 | -> | Plus |
| X | 19624528..19624628 | 1077..1179 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:30 Download gff for
BO25006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19517243..19517387 | 17..161 | 100 | -> | Plus |
| arm_X | 19517450..19517581 | 162..293 | 100 | -> | Plus |
| arm_X | 19517648..19517747 | 294..393 | 100 | -> | Plus |
| arm_X | 19517813..19518495 | 394..1076 | 100 | -> | Plus |
| arm_X | 19518561..19518661 | 1077..1179 | 98 | | Plus |
BO25006.pep Sequence
Translation from 16 to 1195
> BO25006.pep
MEQSQSQRQAWPSSSAGGGKAQDSGVLTREDFDGGPVSIDEVDTGLFLGN
LTAATHMETLRSFKITHILTLDSVPLPQHILEASFLTTKYIQIADMPRED
ILQHLEGCVDFISSALAQQGNVLVHCYFGVSRSSSTVIAYMMKRHNLDFL
PAYELVKAKRRFVQPNAGFVSQLKLFRRMGCKIDPNCQRYKIHRLRLAGE
QMRKAKILPQSFHSVVRPDPDITRENPEPIVFRCRRCRRVLASKSHVLEH
KPRDRPPQEVVPKEKEEVAAAKLPAQSHDQAENHHGARMLEQLSERIRQS
SLGSPGHESTPNYCRSILFVEPIAWMHRIMLNTQGRLYCPKCEQKLGNFS
WINACKCPCGETMTPAFYLIPSKVELSKAVQNVQTTVASFLDH
BO25006.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:41:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MKP-4-PC | 387 | CG14211-PC | 1..387 | 1..387 | 2038 | 100 | Plus |
| MKP-4-PB | 387 | CG14211-PB | 1..387 | 1..387 | 2038 | 100 | Plus |
| CG10089-PA | 327 | CG10089-PA | 5..167 | 39..207 | 222 | 32.9 | Plus |
| CG10089-PB | 327 | CG10089-PB | 5..167 | 39..207 | 222 | 32.9 | Plus |
| CG10089-PC | 327 | CG10089-PC | 11..167 | 45..207 | 220 | 33.5 | Plus |
