Clone BO25070 Report

Search the DGRC for BO25070

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:250
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG14894-RA
Protein status:BO25070.pep: Imported from assembly
Sequenced Size:823

Clone Sequence Records

BO25070.complete Sequence

823 bp assembled on 2010-06-03

GenBank Submission: KX795249

> BO25070.complete
GAAGTTATCAGTCGACATGGCAGGCAACGCCAACAGTGACGACGAATTCC
ATGATGCGATCGGGGAGGAGATAACCGAAAAAGAGGCCACCAGCACGCGG
CAGAGCGAAAAGGACGTGGATGAGATCGTGGAGAAGCAAAACCAGCTGGC
GTTGGATGACGAAGCGGAACAGGGCGCGGCTGGTGGAGATTCCATCGCGA
CACCAACGACAGTGGACTCTGAGCTAACCATTGAGGAGTTGCGCGAACGG
GAGAAGGATCTCAGCCCAGAGCAGCTGACAGCTAACAAAGAAAAGGCCGA
TAAGCTGAAAGTTGAGGGCAACGAGTTGTTCAAAAATGACGACGCCGAAG
GCGCCGCCAAGACCTACACAGAAGCCTTAGACATTTGCCCCTCGGCCAGC
TCCAAGGAGCGAGCAGTTCTCTACGGAAACAGGGCTGCTGCCAAGATTAA
GCTGGAGGCCAACAAAGCGGCCATCGACGACTGCACAAAGGCTATAGAAC
TGTGGCCGGAGTATGTGAGGGTGCTTTTAAGGCGCGCCAAGCTCTATGAG
CAAGAAGACAAGCCCGACGAGGCTCTGGAGGACTACAAAAAAGTTACTGA
GATCGATCCCGGTCAGCAGGAGGCTCGCGAGGCTCAGATTCGGCTGCCGC
CAATTATAAACGAGCGCAACGAGAAGCTCAAAAACGAGATGATGTCCAGC
TTAAAGGACCTGGGCAACATGATACTCAAACCGTTCGGACTGTCTACACA
GAATTTCCAAATGCAACAGGATCCCAACACGGGCTCGTATTCCATCAACT
TTAAAGCAAGCTTTCTAGACCAT

BO25070.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14894-RB 792 CG14894-PB 1..789 17..805 3945 100 Plus
CG14894-RA 792 CG14894-PA 1..789 17..805 3945 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14894-RB 1111 CG14894-RB 91..879 17..805 3945 100 Plus
CG14894-RA 948 CG14894-RA 91..879 17..805 3945 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16442402..16442917 532..17 2580 100 Minus
3R 32079331 3R 16442075..16442350 805..530 1380 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:50:41 has no hits.

BO25070.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:52 Download gff for BO25070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14894-RA 91..879 17..807 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:23 Download gff for BO25070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14894-RA 91..879 17..807 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:58:49 Download gff for BO25070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14894-RA 91..879 17..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:58:49 Download gff for BO25070.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16442073..16442348 532..807 99 <- Minus
3R 16442403..16442917 17..531 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:23 Download gff for BO25070.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12267795..12268070 532..807 99 <- Minus
arm_3R 12268125..12268639 17..531 100   Minus

BO25070.pep Sequence

Translation from 16 to 823

> BO25070.pep
MAGNANSDDEFHDAIGEEITEKEATSTRQSEKDVDEIVEKQNQLALDDEA
EQGAAGGDSIATPTTVDSELTIEELREREKDLSPEQLTANKEKADKLKVE
GNELFKNDDAEGAAKTYTEALDICPSASSKERAVLYGNRAAAKIKLEANK
AAIDDCTKAIELWPEYVRVLLRRAKLYEQEDKPDEALEDYKKVTEIDPGQ
QEAREAQIRLPPIINERNEKLKNEMMSSLKDLGNMILKPFGLSTQNFQMQ
QDPNTGSYSINFKASFLDH

BO25070.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14894-PB 263 CG14894-PB 1..263 1..263 1331 100 Plus
CG14894-PA 263 CG14894-PA 1..263 1..263 1331 100 Plus
Hop-PA 490 CG2720-PA 289..463 75..254 187 34.7 Plus
unc-45-PA 947 CG2708-PA 4..137 88..220 186 35.3 Plus
Tom70-PC 589 CG6756-PC 61..185 65..189 173 29.6 Plus