BO25071.complete Sequence
3175 bp assembled on 2012-04-24
GenBank Submission: KX795570
> BO25071.complete
GAAGTTATCAGTCGACATGTCGACGGCCCTGGTTTATTGGCAGTCAATGA
ATGGCGGCGATCCGGTTGACAAGGCCACCGCGGATTGGGCGCCATTCGTG
GTTGGTGCAGCAGCTGGTGGCAGCTTCAGTAGCAGCATCATCACCAGCAG
CAGCAGCAGCTTGAACCACCATCCGCACAACGGCCACCACAATCACCATC
ATCCGCCTCATTACATCAATTATTTGGCGCAAATTGGCTGCCAGCATCGT
GTCAGAAATTGGCCAACAAATGGCAATCAGGATCAGGCGGATGACGACGA
CGCTGGCCATCAGATCATCTCTAAATTCCTGCCCAAAAGTGCCTGGGACA
CGGTGCTGTTGGATGTGAAGCGGGATGTAGATGAAGATGGAGATAGAGAT
AGAGATCGGGTCGATGGCAATGTGCTGATGGTTCAGGGATCGTCATCATC
ATCATCGAGAATGAAGGCGGAACGGGCACTCTATTATACTATGTCCGCTT
ATGGGTCCAGCGGCGGCAGCGTCGACGCAGCGCAGGGCAGCGGAAGCGGG
GGCGGAAGACAGCGCCACGCCCCACTCTACGGGCGATTCGTCGACGCAGA
GGATCTGCCTGCCACGCACCGGGATGTCATGCACCATCACTCTAGTCCCT
CGTCTTCGTCGGAGGTGCGCGCCATGCAGGCCCGGATTCCCAACCACTTT
CGGGAGCCCGCCTCGGGACCTTTGCGCAAGCTGAGTGTCGATCTGATAAA
GACCTACAAGCACATCAACGAGGTTTACTATGCGAAAAAGAAACGTCGTG
CCCAGCAGACGCAAGGAGACGACGACTCATCTAACAAAAAGGAGCGAAAA
CTTTATAACGACGGCTACGACGACGATAATCACGACTATATAATCAAGAA
TGGCGAAAAGTTTTTGGATCGCTACGAGATCGACTCTCTGATCGGCAAAG
GCAGTTTTGGCCAGGTGGTGAAGGCTTACGACCACGAGGAGCAGTGCCAC
GTGGCGATCAAGATAATTAAGAATAAGAAACCGTTCCTAAACCAGGCACA
GATCGAGGTCAAGTTGCTCGAGATGATGAACCGGGCGGATGCCGAAAACA
AATACTACATCGTTAAGCTCAAGCGGCACTTCATGTGGCGCAACCACCTG
TGCCTGGTGTTCGAGCTGCTCTCATACAACCTGTACGACCTGCTGCGGAA
CACCAACTTCCGGGGCGTTTCGCTGAACCTCACGCGCAAGTTCGCCCAGC
AGCTGTGCACCGCACTGCTCTTCCTCAGCACCCCCGAACTGAACATAATT
CACTGTGATTTGAAGCCCGAGAACATCCTGCTCTGCAACCCGAAGCGCTC
GGCGATCAAGATCGTTGACTTTGGCAGCTCCTGCCAGTTGGGACAGCGGA
TCTACCACTACATCCAGTCGCGCTTCTACCGCTCGCCGGAGGTGCTGCTT
GGCATCCAGTATGACCTGGCCATCGATATGTGGTCACTGGGCTGCATCTT
GGTCGAGATGCACACCGGCGAGCCGCTCTTCTCCGGCTGCAACGAGGTGG
ACCAGATGAACAAGATCGTCGAGGTGCTGGGCATGCCGCCCAAGTATCTG
CTCGACCAGGCGCACAAGACCCGCAAGTTCTTCGACAAGATCGTCGCCGA
TGGCTCCTATGTGCTGAAGAAGAATCAGAACGGCAGGAAGTACAAGCCGC
CAGGATCCCGCAAGCTTCACGACATCCTCGGAGTGGAAACAGGCGGTCCA
GGGGGCAGGCGTCTCGATGAGCCGGGCCACTCCGTCTCGGACTATCTGAA
GTTCAAGGATCTGATCCTGCGCATGCTCGACTTTGACCCCAAGACACGGG
TCACGCCCTACTATGCCCTGCAGCACAACTTCTTCAAGCGCACGGCAGAC
GAGGCAACCAATACGAGCGGCGCGGGCGCCACAGCGAATGCAGGAGCCGG
TGGCTCCGGTTCCAGCGGAGCAGGAGGCTCCAGCGGCGGAGGCGTCGGCG
GTGGCCTCGGAGCGAGCAACAGCAGTAGCGGTGCGGTCTCCTCATCCAGT
GCAGCGGCTCCAACGGCGGCGACAGCAGCGGCCACGGCCGCAGGATCCTC
CGGTTCGGGTTCAAGTGTCGGCGGGGGATCCTCCGCAGCGCAGCAACAGC
AGGCGATGCCGCTGCCATTGCCGCTTCCCTTGCCGTTGCCACCACTCGCG
GGTCCTGGCGGTGCGTCAGATGGCCAATGTCACGGCCTGCTTATGCATTC
GGTGGCAGCCAACGCGATGAACAACTTCTCCGCTCTGAGCCTGCAGTCCA
ACGCCCATCCGCCGCCATCGCTGGCCAATAGCCATCACAGCACCAACAGC
CTGGGCAGCCTGAATCACATCAGTCCCGGCAGCACCGGCTGCCACAACAA
CAACAGCAACAGCAGCAACAACAACACACGCCACAGTCGTCTGTACGGCA
GCAACATGGTGAACATGGTGGGCCACCACAACAGCGGCAGCAGCAACAAC
CACAACAGCATCAGCTATCCGCACGCCATGGAATGTGATCCGCCGCAGAT
GCCGCCACCGCCGCCAAACGGACACGGCAGGATGCGGGTGCCAGCGATAA
TGCAACTGCAACCGAACAGCTATGCGCCCAATTCGGTGCCCTATTACGGC
AACATGTCGTCCTCGTCGGTGGCTGCGGCGGCGGCAGCGGCAGCAGCTGC
TGCCTCGCACCTAATGATGACCGATTCGAGTGTGATTAGCGCCTCGGCGG
CGGGCGGTGGCCAGGGCGGCGGCAATCCCGGCCAGAATCCGGTTACGCCG
TCAGCTGCCGCCTTTCTCTTCCCATCTCAGCCCGCCGGAACGCTCTATGG
CACGGCGCTCGGTTCGCTGAGCGACCTGCCACTGCCGATGCCACTGCCCA
TGTCCGTGCCCCTGCAACTGCCGCCCTCGTCGTCGTCGTCCGTCTCCTCG
GGATCAGCATCGGTTGGATCCGGAGGAGTGGGTGTCGGCGTGGTTGGCCA
AAGGCGGCACATCACCGGACCCGCCGCGCAGGTGGGCATCTCTCAAAGTG
TCGGCAGTGGCAGCAGCGGCTCGGCCACCGGAGCCAGCAGCAGCGATGCC
TCCTCGTCGTCACCCATGGTGGGCGTTTGTGTTCAACAGAATCCTGTAGT
TATACATGCAAGCTTTCTAGACCAT
BO25071.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:36:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mnb-RH | 3144 | CG42273-PH | 1..3141 | 17..3157 | 15705 | 100 | Plus |
| mnb-RE | 2727 | CG42273-PE | 59..2724 | 492..3157 | 13330 | 100 | Plus |
| mnb-RI | 2232 | CG42273-PI | 1..2218 | 17..2234 | 11090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:36:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mnb-RH | 4228 | CG42273-RH | 162..3302 | 17..3157 | 15705 | 100 | Plus |
| mnb-RE | 5507 | CG42273-RE | 1916..4581 | 492..3157 | 13330 | 100 | Plus |
| mnb-RI | 2978 | CG42273-RI | 162..2379 | 17..2234 | 11090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:36:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17863623..17864546 | 3157..2234 | 4620 | 100 | Minus |
| X | 23542271 | X | 17868981..17869817 | 2235..1399 | 4185 | 100 | Minus |
| X | 23542271 | X | 17874405..17874879 | 491..17 | 2375 | 100 | Minus |
| X | 23542271 | X | 17869893..17870180 | 1399..1112 | 1440 | 100 | Minus |
| X | 23542271 | X | 17870485..17870659 | 945..771 | 875 | 100 | Minus |
| X | 23542271 | X | 17870255..17870423 | 1112..944 | 845 | 100 | Minus |
| X | 23542271 | X | 17873255..17873400 | 637..492 | 730 | 100 | Minus |
| X | 23542271 | X | 17872617..17872753 | 774..638 | 685 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 04:36:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2484 | 2328..2512 | 326 | 67.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6885 | 2355..2523 | 287 | 66.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2355..2539 | 2326..2523 | 250 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2472 | 2389..2558 | 247 | 64.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6920 | 2326..2500 | 243 | 62.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6712..6860 | 2361..2515 | 240 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..7016 | 2306..2509 | 226 | 60.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2463..2667 | 2338..2518 | 208 | 60.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6829 | 2408..2517 | 190 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6862 | 2446..2569 | 175 | 61.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1497..1591 | 2421..2519 | 162 | 64.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1059..1163 | 2402..2512 | 155 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6787 | 2472..2517 | 149 | 80.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6766 | 2473..2517 | 146 | 82.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1520..1568 | 2472..2517 | 130 | 77.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2724..2873 | 2357..2517 | 130 | 59.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2387 | 2449..2517 | 129 | 65.2 | Plus |
| invader2 | 5124 | invader2 INVADER2 5124bp | 603..719 | 2393..2509 | 126 | 58.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1073..1159 | 2446..2529 | 121 | 63.2 | Plus |
BO25071.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-11 10:18:43 Download gff for
BO25071.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mnb-RD | 162..3306 | 17..3163 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 11:27:37 Download gff for
BO25071.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mnb-RH | 162..3302 | 17..3159 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:11 Download gff for
BO25071.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mnb-RH | 162..3302 | 17..3159 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:53:25 Download gff for
BO25071.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mnb-RH | 162..3302 | 17..3159 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:53:25 Download gff for
BO25071.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17870486..17870657 | 773..944 | 100 | <- | Minus |
| X | 17872619..17872753 | 638..772 | 100 | <- | Minus |
| X | 17873255..17873400 | 492..637 | 100 | <- | Minus |
| X | 17863619..17864545 | 2235..3159 | 99 | <- | Minus |
| X | 17868982..17869816 | 1400..2234 | 100 | <- | Minus |
| X | 17869893..17870179 | 1113..1399 | 100 | <- | Minus |
| X | 17870255..17870422 | 945..1112 | 100 | <- | Minus |
| X | 17874405..17874879 | 17..491 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:11 Download gff for
BO25071.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17757652..17758578 | 2235..3159 | 99 | <- | Minus |
| arm_X | 17764519..17764690 | 773..944 | 100 | <- | Minus |
| arm_X | 17766652..17766786 | 638..772 | 100 | <- | Minus |
| arm_X | 17767288..17767433 | 492..637 | 100 | <- | Minus |
| arm_X | 17763015..17763849 | 1400..2234 | 100 | <- | Minus |
| arm_X | 17763926..17764212 | 1113..1399 | 100 | <- | Minus |
| arm_X | 17764288..17764455 | 945..1112 | 100 | <- | Minus |
| arm_X | 17768438..17768912 | 17..491 | 100 | | Minus |
BO25071.pep Sequence
Translation from 16 to 3175
> BO25071.pep
MSTALVYWQSMNGGDPVDKATADWAPFVVGAAAGGSFSSSIITSSSSSLN
HHPHNGHHNHHHPPHYINYLAQIGCQHRVRNWPTNGNQDQADDDDAGHQI
ISKFLPKSAWDTVLLDVKRDVDEDGDRDRDRVDGNVLMVQGSSSSSSRMK
AERALYYTMSAYGSSGGSVDAAQGSGSGGGRQRHAPLYGRFVDAEDLPAT
HRDVMHHHSSPSSSSEVRAMQARIPNHFREPASGPLRKLSVDLIKTYKHI
NEVYYAKKKRRAQQTQGDDDSSNKKERKLYNDGYDDDNHDYIIKNGEKFL
DRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKL
LEMMNRADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG
VSLNLTRKFAQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIV
DFGSSCQLGQRIYHYIQSRFYRSPEVLLGIQYDLAIDMWSLGCILVEMHT
GEPLFSGCNEVDQMNKIVEVLGMPPKYLLDQAHKTRKFFDKIVADGSYVL
KKNQNGRKYKPPGSRKLHDILGVETGGPGGRRLDEPGHSVSDYLKFKDLI
LRMLDFDPKTRVTPYYALQHNFFKRTADEATNTSGAGATANAGAGGSGSS
GAGGSSGGGVGGGLGASNSSSGAVSSSSAAAPTAATAAATAAGSSGSGSS
VGGGSSAAQQQQAMPLPLPLPLPLPPLAGPGGASDGQCHGLLMHSVAANA
MNNFSALSLQSNAHPPPSLANSHHSTNSLGSLNHISPGSTGCHNNNSNSS
NNNTRHSRLYGSNMVNMVGHHNSGSSNNHNSISYPHAMECDPPQMPPPPP
NGHGRMRVPAIMQLQPNSYAPNSVPYYGNMSSSSVAAAAAAAAAAASHLM
MTDSSVISASAAGGGQGGGNPGQNPVTPSAAAFLFPSQPAGTLYGTALGS
LSDLPLPMPLPMSVPLQLPPSSSSSVSSGSASVGSGGVGVGVVGQRRHIT
GPAAQVGISQSVGSGSSGSATGASSSDASSSSPMVGVCVQQNPVVIHASF
LDH
BO25071.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mnb-PH | 1047 | CG42273-PH | 1..1047 | 1..1047 | 5504 | 100 | Plus |
| mnb-PE | 908 | CG42273-PE | 20..908 | 159..1047 | 4642 | 99.9 | Plus |
| mnb-PI | 743 | CG42273-PI | 1..739 | 1..739 | 3907 | 100 | Plus |
| mnb-PF | 607 | CG7826-PC | 20..600 | 159..739 | 3045 | 99.8 | Plus |
| mnb-PG | 604 | CG42273-PG | 20..600 | 159..739 | 3045 | 99.8 | Plus |
