BO25072.complete Sequence
892 bp assembled on 2010-06-03
GenBank Submission: KX797563
> BO25072.complete
GAAGTTATCAGTCGACATGAAGGTCCTAACTCTTATCCTCTTCACTGCCT
TGGTGGCAGTGGCTTCTGGCCGCCCCAATGGCGGTTGGTTCGGAAATTTT
GGCAGCAACTGGGCCAGGAGGTTCGGTTGGGGCTCCGGTGACGATGAAAT
CGTGCAGGAACAGAGGTGGAATAGCCAAAATCAGTGGAATCCAAATGGCA
ACGGTCAGGGTCAGTGGGATGGCGAAAATGGTCAGGGACAATCTCACGGA
AACAATCAAGGCCTCGGCCAAGGAAACGGACACGGAAACAACCATCATGG
TCATCATGGCAACAGTCATGGTCATGGTAATGGTCAAGGCCACGGTGGAC
AGCGCCCTCCTCCACCACCACCAACGGATCTGCCTGAGTTGACCACCGAG
GATGATGTGGTATCCACCACGGATGTTACCAGTCCCGCGGAGGAGACCAC
TCTGGCACCCGAGGTTCCAGAAGAATCTACCAGTCAGGCACCAGAGGAAA
TCACCACCGGCTCTGAAGAAGGCAGCGGTTCCTCGGAGGACACCACCACC
CTGGCCCCTGAAGTTCCGGAGGAATCCACCACTCAGGCACCGGAGGAAAG
CACCACCGACTCTGAGGATGGTAGCGGTTCTGAGGATACCACTCAGGCTC
CGGAAGAAACCACCACCGAGGAGCCTGAAGAATCCACCAGCGAGGCTCCC
GAAGAATCCTCCAGCGAGGCGCCCGAAGAATCCACCACAGAGGAGCCCGA
AGAATCGACAACCGAGGCGCCTGTAGAATCCACAAGTGAGGCACCCGAAG
AATCGACGACCGAGGCTCCCGAAGAATCCACAAGTGAGGCGCCGGAAGAA
TCCACTATCGATTCTTCAGCGGTCGCAAGCTTTCTAGACCAT
BO25072.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:52:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fst-RA | 861 | CG9434-PA | 1..858 | 17..874 | 4290 | 100 | Plus |
| Fst-RA | 861 | CG9434-PA | 629..788 | 693..852 | 395 | 83.1 | Plus |
| Fst-RA | 861 | CG9434-PA | 677..836 | 645..804 | 395 | 83.1 | Plus |
| Fst-RA | 861 | CG9434-PA | 637..815 | 677..855 | 385 | 81 | Plus |
| Fst-RA | 861 | CG9434-PA | 661..839 | 653..831 | 385 | 81 | Plus |
| Fst-RA | 861 | CG9434-PA | 629..767 | 717..855 | 320 | 82 | Plus |
| Fst-RA | 861 | CG9434-PA | 701..839 | 645..783 | 320 | 82 | Plus |
| Fst-RA | 861 | CG9434-PA | 637..740 | 749..852 | 250 | 82.7 | Plus |
| Fst-RA | 861 | CG9434-PA | 733..836 | 653..756 | 250 | 82.7 | Plus |
| Fst-RA | 861 | CG9434-PA | 629..719 | 765..855 | 200 | 81.3 | Plus |
| Fst-RA | 861 | CG9434-PA | 749..839 | 645..735 | 200 | 81.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:52:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fst-RA | 1177 | CG9434-RA | 24..885 | 13..874 | 4295 | 99.9 | Plus |
| Fst-RA | 1177 | CG9434-RA | 656..815 | 693..852 | 395 | 83.1 | Plus |
| Fst-RA | 1177 | CG9434-RA | 704..863 | 645..804 | 395 | 83.1 | Plus |
| Fst-RA | 1177 | CG9434-RA | 664..842 | 677..855 | 385 | 81 | Plus |
| Fst-RA | 1177 | CG9434-RA | 688..866 | 653..831 | 385 | 81 | Plus |
| Fst-RA | 1177 | CG9434-RA | 656..794 | 717..855 | 320 | 82 | Plus |
| Fst-RA | 1177 | CG9434-RA | 728..866 | 645..783 | 320 | 82 | Plus |
| Fst-RA | 1177 | CG9434-RA | 664..767 | 749..852 | 250 | 82.7 | Plus |
| Fst-RA | 1177 | CG9434-RA | 760..863 | 653..756 | 250 | 82.7 | Plus |
| Fst-RA | 1177 | CG9434-RA | 656..746 | 765..855 | 200 | 81.3 | Plus |
| Fst-RA | 1177 | CG9434-RA | 776..866 | 645..735 | 200 | 81.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:52:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9645270..9646131 | 874..13 | 4295 | 99.9 | Minus |
| 3R | 32079331 | 3R | 9645292..9645451 | 804..645 | 395 | 83.1 | Minus |
| 3R | 32079331 | 3R | 9645340..9645499 | 852..693 | 395 | 83.1 | Minus |
| 3R | 32079331 | 3R | 9645289..9645467 | 831..653 | 385 | 81 | Minus |
| 3R | 32079331 | 3R | 9645313..9645491 | 855..677 | 385 | 81 | Minus |
| 3R | 32079331 | 3R | 9645289..9645427 | 783..645 | 320 | 82 | Minus |
| 3R | 32079331 | 3R | 9645361..9645499 | 855..717 | 320 | 82 | Minus |
| 3R | 32079331 | 3R | 9645292..9645395 | 756..653 | 250 | 82.7 | Minus |
| 3R | 32079331 | 3R | 9645388..9645491 | 852..749 | 250 | 82.7 | Minus |
| 3R | 32079331 | 3R | 9645289..9645379 | 735..645 | 200 | 81.3 | Minus |
| 3R | 32079331 | 3R | 9645409..9645499 | 855..765 | 200 | 81.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:52:29 has no hits.
BO25072.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 14:00:03 Download gff for
BO25072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fst-RA | 26..883 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:31 Download gff for
BO25072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fst-RA | 24..881 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:27 Download gff for
BO25072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fst-RA | 28..885 | 17..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:27 Download gff for
BO25072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9645268..9646127 | 17..876 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:31 Download gff for
BO25072.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5470990..5471849 | 17..876 | 99 | | Minus |
BO25072.pep Sequence
Translation from 16 to 892
> BO25072.pep
MKVLTLILFTALVAVASGRPNGGWFGNFGSNWARRFGWGSGDDEIVQEQR
WNSQNQWNPNGNGQGQWDGENGQGQSHGNNQGLGQGNGHGNNHHGHHGNS
HGHGNGQGHGGQRPPPPPPTDLPELTTEDDVVSTTDVTSPAEETTLAPEV
PEESTSQAPEEITTGSEEGSGSSEDTTTLAPEVPEESTTQAPEESTTDSE
DGSGSEDTTQAPEETTTEEPEESTSEAPEESSSEAPEESTTEEPEESTTE
APVESTSEAPEESTTEAPEESTSEAPEESTIDSSAVASFLDH
BO25072.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:41:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fst-PA | 286 | CG9434-PA | 1..286 | 1..286 | 1533 | 100 | Plus |
| CG6296-PA | 676 | CG6296-PA | 408..587 | 120..285 | 300 | 44.9 | Plus |
| Mur18B-PA | 481 | CG7874-PA | 64..211 | 124..280 | 272 | 53.1 | Plus |
| CG6296-PA | 676 | CG6296-PA | 450..627 | 116..290 | 266 | 39 | Plus |
| Mur18B-PA | 481 | CG7874-PA | 83..262 | 108..288 | 261 | 39.8 | Plus |
| CG6296-PA | 676 | CG6296-PA | 341..532 | 103..284 | 260 | 40.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 382..589 | 114..282 | 242 | 39.5 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 286..493 | 114..282 | 241 | 39.7 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 526..733 | 114..282 | 241 | 39.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 334..532 | 114..280 | 240 | 39.6 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 190..397 | 114..282 | 238 | 39.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 238..445 | 114..282 | 237 | 39.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 478..685 | 114..282 | 232 | 38.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 574..772 | 114..280 | 232 | 38.6 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1219..1396 | 126..280 | 230 | 39.2 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 979..1170 | 126..280 | 229 | 39.4 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 910..1108 | 114..280 | 227 | 38.2 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1342..1555 | 114..288 | 227 | 36.7 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1150..1357 | 114..282 | 226 | 37.4 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 142..349 | 114..282 | 223 | 38.1 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1102..1300 | 114..280 | 221 | 36.9 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 430..603 | 114..287 | 218 | 40 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 718..908 | 114..284 | 218 | 36.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 862..1069 | 114..282 | 217 | 37.1 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1246..1444 | 114..280 | 217 | 39.2 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 622..812 | 114..284 | 215 | 37 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1006..1191 | 114..280 | 215 | 37.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 814..1035 | 114..287 | 213 | 37.1 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1054..1275 | 114..287 | 213 | 37.1 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 670..891 | 114..287 | 211 | 37.5 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1294..1479 | 114..280 | 209 | 37.3 | Plus |
| Mur18B-PA | 481 | CG7874-PA | 131..277 | 115..272 | 206 | 39.9 | Plus |
| Muc18B-PB | 308 | CG7876-PB | 89..255 | 115..288 | 205 | 34.8 | Plus |
| CG6296-PA | 676 | CG6296-PA | 482..654 | 119..278 | 202 | 37.4 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 113..301 | 119..282 | 202 | 35.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 766..951 | 114..280 | 202 | 36.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1390..1588 | 114..290 | 190 | 34.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1438..1622 | 114..276 | 174 | 35.1 | Plus |
| CG6296-PA | 676 | CG6296-PA | 531..658 | 119..242 | 154 | 31.8 | Plus |
