BO25085.complete Sequence
1597 bp assembled on 2010-06-04
GenBank Submission: KX798279
> BO25085.complete
GAAGTTATCAGTCGACATGAATACATTGAGCAGTGCGCGATCTGTGGCGA
TTTACGTGGGTCCCGTTCGATCTTCAAGATCAGCCTCCGTTTTGGCACAT
GAACAAGCTAAATCTAGTATAACGGAGGAGCACAAGACCTACGATGAGAT
TCCGCGGCCCAACAAATTCAAATTTATGAGGGCTTTCATGCCCGGTGGTG
AATTCCAAAATGCATCGATTACGGAATACACCAGTGCCATGCGAAAGCGC
TATGGAGATATCTATGTAATGCCCGGAATGTTTGGCCGCAAGGATTGGGT
CACCACTTTCAACACAAAGGACATTGAGATGGTATTCCGCAACGAGGGTA
TCTGGCCACGTCGTGATGGCCTGGATTCCATTGTATATTTCCGCGAACAC
GTTCGACCAGATGTTTACGGTGAGGTTCAAGGATTGGTGGCTTCACAAAA
TGAGGCATGGGGAAAACTACGATCAGCCATTAATCCCATCTTTATGCAAC
CCAGGGGCTTGAGAATGTATTATGAACCATTGTCTAATATCAATAATGAG
TTTATAGAGCGCATTAAGGAAATCCGCGATCCAAAAACTCTAGAAGTCCC
CGAAGATTTTACGGATGAAATAAGCCGGCTTGTTTTCGAGTCACTCGGCC
TGGTGGCTTTCGATCGGCAAATGGGTCTGATTAGAAAAAACCGCGATAAT
TCCGATGCATTGACCCTCTTCCAGACCTCGAGGGATATTTTCCGTCTCAC
ATTTAAGCTAGACATTCAGCCCTCCATGTGGAAGATCATATCGACGCCCA
CCTACAGGAAAATGAAGCGAACTCTCAATGACAGTTTGAATGTGTCCCAG
AAAATGCTGAAGGAAAATCAGGATGCACTGGAAAAGCGCCGCCAGGCTGG
CGAAAAAATAAATAGTAACAGTATGCTGGAGAGATTAATGGAGATCGATC
CCAAGGTGGCGGTGATTATGAGTCTGGACATCCTATTCGCTGGTGTGGAT
GCCACAGCCACGCTTCTGTCGGCTGTTTTACTCTGCCTCTCAAAGCATCC
GGATAAGCAGGCCAAACTGCGGGAGGAGCTCTTGAGCATCATGCCCACAA
AGGATTCCCTACTCAACGAGGAGAACATGAAGGATATGCCATATTTGAGG
GCTGTGATCAAGGAGACACTGCGATACTATCCCAATGGCTTTGGAACCAT
GAGAACCTGCCAAAATGATGTGATACTTTCGGGTTACCGGGTGCCCAAGG
GAACGACTGTCCTGCTCGGCTCAAATGTGCTGATGAAGGAAGCTACATAT
TATCCACGACCAGATGAATTTCTGCCGGAGCGCTGGTTAAGGGATCCGGA
GACCGGAAAGAAGATGCAGGTCAGCCCCTTCACGTTCCTTCCCTTTGGCT
TTGGACCCCGCATGTGCATTGGCAAACGGGTGGTGGATCTGGAAATGGAG
ACCACAGTGGCCAAGTTGATTCGCAATTTCCATGTGGAGTTCAATCGGGA
TGCCAGCCGTCCATTCAAGACCATGTTCCTCATGGAACCGGCCATTACGT
TCCCCTTCAAATTCACGGATATCGAACAAGCAAGCTTTCTAGACCAT
BO25085.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:53:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp12d1-d-RA | 1566 | CG33503-PA | 1..1563 | 17..1579 | 7815 | 100 | Plus |
| Cyp12d1-p-RB | 1566 | CG30489-PB | 1..1563 | 17..1579 | 7770 | 99.8 | Plus |
| Cyp12d1-p-RA | 1566 | CG30489-PA | 1..1563 | 17..1579 | 7770 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:53:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp12d1-d-RA | 1812 | CG33503-RA | 34..1596 | 17..1579 | 7815 | 100 | Plus |
| Cyp12d1-p-RB | 4482 | CG30489-RB | 37..1599 | 17..1579 | 7770 | 99.8 | Plus |
| Cyp12d1-p-RA | 1741 | CG30489-RA | 37..1599 | 17..1579 | 7770 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:53:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11123874..11124892 | 1579..561 | 5095 | 100 | Minus |
| 2R | 25286936 | 2R | 11120108..11121126 | 1579..561 | 5050 | 99.7 | Minus |
| 2R | 25286936 | 2R | 11121361..11121686 | 444..119 | 1630 | 100 | Minus |
| 2R | 25286936 | 2R | 11125127..11125452 | 444..119 | 1630 | 100 | Minus |
| 2R | 25286936 | 2R | 11121190..11121306 | 561..445 | 585 | 100 | Minus |
| 2R | 25286936 | 2R | 11124956..11125072 | 561..445 | 585 | 100 | Minus |
| 2R | 25286936 | 2R | 11121747..11121848 | 118..17 | 510 | 100 | Minus |
| 2R | 25286936 | 2R | 11125513..11125614 | 118..17 | 510 | 100 | Minus |
| 2R | 25286936 | 2R | 11123006..11123103 | 348..251 | 205 | 80.6 | Minus |
| 2R | 25286936 | 2R | 11126772..11126869 | 348..251 | 205 | 80.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:53:10 has no hits.
BO25085.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-04 09:59:44 Download gff for
BO25085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp12d1-d-RA | 1..1563 | 17..1581 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:37 Download gff for
BO25085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp12d1-d-RA | 34..1596 | 17..1581 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:38 Download gff for
BO25085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp12d1-d-RA | 34..1596 | 17..1581 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:38 Download gff for
BO25085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11125513..11125614 | 17..118 | 100 | | Minus |
| 2R | 11123872..11124891 | 562..1581 | 99 | <- | Minus |
| 2R | 11124956..11125072 | 445..561 | 100 | <- | Minus |
| 2R | 11125127..11125452 | 119..444 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:37 Download gff for
BO25085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7011377..7012396 | 562..1581 | 99 | <- | Minus |
| arm_2R | 7012461..7012577 | 445..561 | 100 | <- | Minus |
| arm_2R | 7012632..7012957 | 119..444 | 100 | <- | Minus |
| arm_2R | 7013018..7013119 | 17..118 | 100 | | Minus |
BO25085.pep Sequence
Translation from 16 to 1597
> BO25085.pep
MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNK
FKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNT
KDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGK
LRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTD
EISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDI
QPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINS
NSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAK
LREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQN
DVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKM
QVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPF
KTMFLMEPAITFPFKFTDIEQASFLDH
BO25085.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:09:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp12d1-d-PA | 521 | CG33503-PA | 1..521 | 1..521 | 2695 | 100 | Plus |
| Cyp12d1-p-PB | 521 | CG30489-PB | 1..521 | 1..521 | 2683 | 99.4 | Plus |
| Cyp12d1-p-PA | 521 | CG30489-PA | 1..521 | 1..521 | 2683 | 99.4 | Plus |
| Cyp12a4-PA | 536 | CG6042-PA | 29..534 | 24..519 | 1143 | 42.8 | Plus |
| Cyp12a5-PA | 536 | CG11821-PA | 45..534 | 40..519 | 1143 | 45.1 | Plus |
