Clone BO25092 Report

Search the DGRC for BO25092

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:250
Well:92
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO25092.pep: Imported from assembly
Sequenced Size:874

Clone Sequence Records

BO25092.complete Sequence

874 bp assembled on 2010-06-03

> BO25092.complete
GAAGTTATCAGTCGACATGTTATCTGGGTTTTTGCGACGAGGCGTCCAAA
GAGCACGGTTCACCTTCACCCAGCAACTCGGCGAAGATCTTTTGAGCGGC
GCAGCGGCAACACTCCACACCCAGATACGCATGATGGATGACATTGCGCT
GGACGCGGCCAAGAAGACGGCGGCCCGCACGGCGGTGGACCAGTGGGTGA
CTGAGGATACGAAGATTCTGGGGATTGGCAGCGGATCGACGGTGGTGTAC
GCCGTGCAGCGGATCGCGGAGCGCGTGTGGAAGGAGGGCGAGCTGACGGA
CCTCATCTGCGTGCCCTCGTCCTACCAGGCGCGCCATCTGATACTCGACT
ACAACCTTAACCTGGGCGATCTGGACAGGAATCCCAACATAGACGTGGCC
ATCGACGGGGCCGACGAGGTCGATCGCCATATGGTGCTGATCAAGGGCGG
CGGCGGCTGCTTGCTGCAGGAGAAGGTGGTGGCCTCCTGCGCCAAGCACT
TCATCGTGGTGGCCGACTACACAAAGAACTCCATCCGCCTGGGCGAGCAG
TGGTGCCGCGGCGTGCCCATCGAGGTGGCGCCCATGGCGTACGTGCCCAT
CAAGCTGCACATCGAGGCGCTTTTCGGCGGCGAGGCCTCGTTGCGTATGG
CCAAGGTGAAGGCGGGACCCATTGTCACGGACAATGGCAACTTCCTCCTG
GACTGGAAGTTCATCGCCAACAGGGAGTACGACTGGGACGAGGTCAACCG
CGCCATCACCCTCATCCCGGGCGTCCTGGAGACGGGCCTGTTCGTGAACA
TGGCCCACAAATGCTACTACGGCATGGCCAATGGCTCGGTCAAGGTCCAG
AACAAGGCAAGCTTTCTAGACCAT

BO25092.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:48:00
Subject Length Description Subject Range Query Range Score Percent Strand
Rpi-RB 726 CG30410-PB 1..723 134..856 3615 100 Plus
Rpi-RC 726 CG30410-PC 1..723 134..856 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
Rpi-RB 1010 CG30410-RB 53..894 15..856 4210 100 Plus
Rpi-RC 1259 CG30410-RC 53..894 15..856 4210 100 Plus
CG30409-RB 818 CG30409-RB 732..818 15..101 435 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23355235..23356076 15..856 4210 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:48:00 has no hits.

BO25092.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-03 13:59:35 Download gff for BO25092.complete
Subject Subject Range Query Range Percent Splice Strand
CG30410-RA 14..848 22..858 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:27 Download gff for BO25092.complete
Subject Subject Range Query Range Percent Splice Strand
Rpi-RC 60..894 22..858 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:09:58 Download gff for BO25092.complete
Subject Subject Range Query Range Percent Splice Strand
Rpi-RC 60..894 22..858 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:09:58 Download gff for BO25092.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23355242..23356076 22..858 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:27 Download gff for BO25092.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19242765..19243599 22..858 99   Plus

BO25092.pep Sequence

Translation from 16 to 874

> BO25092.pep
MLSGFLRRGVQRARFTFTQQLGEDLLSGAAATLHTQIRMMDDIALDAAKK
TAARTAVDQWVTEDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVP
SSYQARHLILDYNLNLGDLDRNPNIDVAIDGADEVDRHMVLIKGGGGCLL
QEKVVASCAKHFIVVADYTKNSIRLGEQWCRGVPIEVAPMAYVPIKLHIE
ALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYDWDEVNRAITLI
PGVLETGLFVNMAHKCYYGMANGSVKVQNKASFLDH

BO25092.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
Rpi-PB 241 CG30410-PB 1..241 40..280 1260 100 Plus
Rpi-PC 241 CG30410-PC 1..241 40..280 1260 100 Plus