Clone BO25104 Report

Search the DGRC for BO25104

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:251
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG14300-RA
Protein status:BO25104.pep: Imported from assembly
Sequenced Size:316

Clone Sequence Records

BO25104.complete Sequence

316 bp assembled on 2010-06-09

GenBank Submission: KX794202

> BO25104.complete
GAAGTTATCAGTCGACATGAAGTCTGTTGTTGCCCTGTTTGCCACCGTTT
TGGCCATTATTTTGGTGGCTGGAGTGAGTGCGGATGCGGGTCGCTCCGCC
TGCAAGGATGAGTCCGAGATTGGACAGACCTATACGCATCACTTCGATGC
CGCTAAGTACTGGCTGTGCGAGACCCTTGGCGTTCCGGCCACCGAGGTGG
ACTGCCCCGCGGGACTGGCCTACATGCATCTGCTCAAGGAGTGCATCCCA
TGGGCCAGTTACATCTGGAAGAAGCCCGAGATGCCACCAACTGTGGCCGC
AAGCTTTCTAGACCAT

BO25104.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14300-RA 285 CG14300-PA 1..282 17..298 1410 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14300-RA 357 CG14300-RA 46..327 17..298 1410 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18693323..18693595 298..26 1365 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:52:04 has no hits.

BO25104.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:29 Download gff for BO25104.complete
Subject Subject Range Query Range Percent Splice Strand
CG14300-RA 30..311 17..300 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:17 Download gff for BO25104.complete
Subject Subject Range Query Range Percent Splice Strand
CG14300-RA 41..322 17..300 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:40 Download gff for BO25104.complete
Subject Subject Range Query Range Percent Splice Strand
CG14300-RA 46..327 17..300 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:40 Download gff for BO25104.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18693320..18693597 20..300 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:17 Download gff for BO25104.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14519042..14519319 20..300 97   Minus

BO25104.pep Sequence

Translation from 16 to 316

> BO25104.pep
MKSVVALFATVLAIILVAGVSADAGRSACKDESEIGQTYTHHFDAAKYWL
CETLGVPATEVDCPAGLAYMHLLKECIPWASYIWKKPEMPPTVAASFLDH

BO25104.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14300-PA 94 CG14300-PA 1..94 1..94 504 100 Plus
CG14645-PA 97 CG14645-PA 1..91 1..90 161 34.1 Plus
CG14245-PB 103 CG14245-PB 22..97 18..92 156 34.2 Plus
CG14245-PA 103 CG14245-PA 22..97 18..92 156 34.2 Plus