Clone BO25111 Report

Search the DGRC for BO25111

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:251
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG34215-RA
Protein status:BO25111.pep: Imported from assembly
Sequenced Size:346

Clone Sequence Records

BO25111.complete Sequence

346 bp assembled on 2010-06-09

GenBank Submission: KX794184

> BO25111.complete
GAAGTTATCAGTCGACATGCGTTCATCTACCGTGCTACTTGCGGCAATCG
CCGTTCTCTTAGTTTCGGGCTACGAAGCTGCCGTTGTCCGAGGCGTCTTC
GAGGATCCAACCCATCCTGGAAAGTGTGTTCTCGAGGGTTTGGTTCTTGA
AAAAGGTCAAAGTGCACGCCACCCACAGAGGTGTGAGCGAATCATATGCG
GAGAAAATAGTGCGGCAGAAATCCAATCATGTGGTGCCTATGGACTTCCC
CCCGGCAAAAAGTTTGGAAAGTACACAAACCCAAACGCAGATTACCCTGA
TTGCTGTAATCGTGAGATTATCAACCAGGCAAGCTTTCTAGACCAT

BO25111.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG34215-RA 315 CG34215-PA 1..312 17..328 1560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG34215-RA 444 CG34215-RA 32..343 17..328 1560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6831551..6831762 228..17 1060 100 Minus
2R 25286936 2R 6831397..6831496 328..229 500 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:52:24 has no hits.

BO25111.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:35 Download gff for BO25111.complete
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 30..341 17..330 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:23 Download gff for BO25111.complete
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 32..343 17..330 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:47 Download gff for BO25111.complete
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 32..343 17..330 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:47 Download gff for BO25111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6831395..6831496 229..330 98 <- Minus
2R 6831551..6831762 17..228 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:23 Download gff for BO25111.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2718900..2719001 229..330 98 <- Minus
arm_2R 2719056..2719267 17..228 100   Minus

BO25111.pep Sequence

Translation from 16 to 346

> BO25111.pep
MRSSTVLLAAIAVLLVSGYEAAVVRGVFEDPTHPGKCVLEGLVLEKGQSA
RHPQRCERIICGENSAAEIQSCGAYGLPPGKKFGKYTNPNADYPDCCNRE
IINQASFLDH

BO25111.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG34215-PA 104 CG34215-PA 1..104 1..104 554 100 Plus
CG34177-PA 107 CG34177-PA 5..105 4..102 203 39.6 Plus
CG2444-PB 114 CG2444-PB 11..107 6..100 136 32 Plus
CG2444-PA 114 CG2444-PA 11..107 6..100 136 32 Plus