BO25111.complete Sequence
346 bp assembled on 2010-06-09
GenBank Submission: KX794184
> BO25111.complete
GAAGTTATCAGTCGACATGCGTTCATCTACCGTGCTACTTGCGGCAATCG
CCGTTCTCTTAGTTTCGGGCTACGAAGCTGCCGTTGTCCGAGGCGTCTTC
GAGGATCCAACCCATCCTGGAAAGTGTGTTCTCGAGGGTTTGGTTCTTGA
AAAAGGTCAAAGTGCACGCCACCCACAGAGGTGTGAGCGAATCATATGCG
GAGAAAATAGTGCGGCAGAAATCCAATCATGTGGTGCCTATGGACTTCCC
CCCGGCAAAAAGTTTGGAAAGTACACAAACCCAAACGCAGATTACCCTGA
TTGCTGTAATCGTGAGATTATCAACCAGGCAAGCTTTCTAGACCAT
BO25111.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:52:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34215-RA | 315 | CG34215-PA | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34215-RA | 444 | CG34215-RA | 32..343 | 17..328 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6831551..6831762 | 228..17 | 1060 | 100 | Minus |
2R | 25286936 | 2R | 6831397..6831496 | 328..229 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:52:24 has no hits.
BO25111.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:35 Download gff for
BO25111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34215-RA | 30..341 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:23 Download gff for
BO25111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34215-RA | 32..343 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:47 Download gff for
BO25111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34215-RA | 32..343 | 17..330 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:47 Download gff for
BO25111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6831395..6831496 | 229..330 | 98 | <- | Minus |
2R | 6831551..6831762 | 17..228 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:23 Download gff for
BO25111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2718900..2719001 | 229..330 | 98 | <- | Minus |
arm_2R | 2719056..2719267 | 17..228 | 100 | | Minus |
BO25111.pep Sequence
Translation from 16 to 346
> BO25111.pep
MRSSTVLLAAIAVLLVSGYEAAVVRGVFEDPTHPGKCVLEGLVLEKGQSA
RHPQRCERIICGENSAAEIQSCGAYGLPPGKKFGKYTNPNADYPDCCNRE
IINQASFLDH
BO25111.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34215-PA | 104 | CG34215-PA | 1..104 | 1..104 | 554 | 100 | Plus |
CG34177-PA | 107 | CG34177-PA | 5..105 | 4..102 | 203 | 39.6 | Plus |
CG2444-PB | 114 | CG2444-PB | 11..107 | 6..100 | 136 | 32 | Plus |
CG2444-PA | 114 | CG2444-PA | 11..107 | 6..100 | 136 | 32 | Plus |