BO25114.complete Sequence
1126 bp assembled on 2010-07-15
GenBank Submission: KX799622
> BO25114.complete
GAAGTTATCAGTCGACATGGACACAAAGCTCGCCTTCATTTCCGGACTCA
TCATGATCCCCACGATATCAGGCGCCCTGACCTTCAATGCAACTCTAATA
TGTAGCTTGGTGGTCAACGGAACCAAGATGAACGATCCTCGGGCGTGCAA
CGCGTGGATTCAGTGCATCGATGGGAGCCCTGTGAGTGGTAGCTGTGCGA
CTGGACTCTTCTACGACCGGGAGAGCCAGAAATGCCTGAGTTCCAGTAGT
ATCAAGTGTCTGTCCAGTGATCCGTGCGCTGCTCTGCCCACCGGATTCGC
GGCTGATCCGTACTCCTGCAATGGTTATTACTATTGCAAGGATGGCAAGG
GGACGCACGGAGTGTGCAACACTGGGATGAATTTCAATTCGGGAACGCAG
GACTGCATCCGCGATTTTCCGTGCTCGAATAAAATGGACCCGGATAGCTA
TTGCAACATCTTGCCGGATGGGGTCTTCGTCAAGGACACGGACAACTGCA
ATGGCTATCAGTTGTGCTGGGATGGCCAGGTGATCAATGGAACCTGTCCG
GGCACCTTCTACTTCAAGGCCTCCACGGCCCAGTGCGATTATCCGCAGAA
TGTGGAGTGTGACTTCGTCCCAGTGCCAGATATTAGCAAGAAGGGTGTAT
GTCCAGAGACGGGTGGATTTATATCGGATAACAAGACCTGCAATGGCTAC
TACTACTGCAAGGATTTGGGCAATGGAGAGTTCTCGCTGGAGCATGGCGT
CTGCTCCGATGGAAGATTTTTCCTGGCCACCGATGGCGGAGCCTGTGTCC
CGCGATCCAAGGTGAAATGCGGCTACGATCGATGCGTGGGCTTGGGCAAT
TCCACCATTCAGCTGGCCAACGAGTCGGATGATGGCTGCAGGGGCTACTC
GATCTGCCAGGATGGCATCGTCATTGGCCAAGGAACTTGTCCGCAGGACG
AGTACTTCGACGAAATAACCCAACGGTGCACCACCCAGGTCATATCATAT
ACCGCCTGTCAGATATCGGAGGCAACCACCGGGTCCCAAGTTCCAAGTGG
CACCACCACCACCACCAGCAGCACCATCACTAGCACCACCATTGCGGTCC
CGGTGTCGGCAAGCTTTCTAGACCAT
BO25114.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6996-RC | 1095 | CG6996-PC | 1..1092 | 17..1108 | 5460 | 100 | Plus |
| CG6996-RB | 1095 | CG6996-PB | 1..1092 | 17..1108 | 5460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:33:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6996-RC | 1828 | CG6996-RC | 87..1183 | 12..1108 | 5470 | 99.9 | Plus |
| CG6996-RB | 1377 | CG6996-RB | 87..1183 | 12..1108 | 5470 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20207867..20208955 | 20..1108 | 5445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:33:22 has no hits.
BO25114.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 09:42:48 Download gff for
BO25114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RA | 1..1056 | 53..1110 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:43 Download gff for
BO25114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RB | 92..1183 | 17..1110 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:31:31 Download gff for
BO25114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RB | 92..1183 | 17..1110 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:31:31 Download gff for
BO25114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20207864..20208955 | 17..1110 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:43 Download gff for
BO25114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20200964..20202055 | 17..1110 | 99 | | Plus |
BO25114.pep Sequence
Translation from 16 to 1126
> BO25114.pep
MDTKLAFISGLIMIPTISGALTFNATLICSLVVNGTKMNDPRACNAWIQC
IDGSPVSGSCATGLFYDRESQKCLSSSSIKCLSSDPCAALPTGFAADPYS
CNGYYYCKDGKGTHGVCNTGMNFNSGTQDCIRDFPCSNKMDPDSYCNILP
DGVFVKDTDNCNGYQLCWDGQVINGTCPGTFYFKASTAQCDYPQNVECDF
VPVPDISKKGVCPETGGFISDNKTCNGYYYCKDLGNGEFSLEHGVCSDGR
FFLATDGGACVPRSKVKCGYDRCVGLGNSTIQLANESDDGCRGYSICQDG
IVIGQGTCPQDEYFDEITQRCTTQVISYTACQISEATTGSQVPSGTTTTT
SSTITSTTIAVPVSASFLDH
BO25114.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:24:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6996-PC | 364 | CG6996-PC | 1..364 | 1..364 | 2016 | 100 | Plus |
| CG6996-PB | 364 | CG6996-PB | 1..364 | 1..364 | 2016 | 100 | Plus |
| CG17145-PB | 334 | CG17145-PB | 3..333 | 4..332 | 468 | 34.6 | Plus |
| CG17145-PA | 334 | CG17145-PA | 3..333 | 4..332 | 468 | 34.6 | Plus |
| CG5883-PA | 339 | CG5883-PA | 34..337 | 28..331 | 425 | 32.4 | Plus |
| CG17145-PB | 334 | CG17145-PB | 41..290 | 97..346 | 175 | 27.7 | Plus |
| CG17145-PA | 334 | CG17145-PA | 41..290 | 97..346 | 175 | 27.7 | Plus |
